STRINGSTRING
laaA laaA MPLDJ20_120505 MPLDJ20_120505 CDX29979.1 CDX29979.1 CDX30001.1 CDX30001.1 CDX30015.1 CDX30015.1 CDX32756.1 CDX32756.1 tftE tftE chqB chqB pcaQ pcaQ CDX33029.1 CDX33029.1 pcaC pcaC pcaH pcaH pcaG pcaG CDX33041.1 CDX33041.1 pobA pobA catJ catJ catI catI pcaC-2 pcaC-2 CDX45776.1 CDX45776.1 CDX45778.1 CDX45778.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
laaAL-amino acid amidase; Belongs to the peptidase S33 family. (301 aa)
MPLDJ20_120505Hypothetical protein; No homology to any previously reported sequences. (243 aa)
CDX29979.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (300 aa)
CDX30001.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (493 aa)
CDX30015.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (288 aa)
CDX32756.1Coenzyme A transferase. (595 aa)
tftEMaleylacetate reductase. (353 aa)
chqBHydroxyquinol 1,2-dioxygenase. (305 aa)
pcaQHTH-type transcriptional regulator PcaQ; Belongs to the LysR transcriptional regulatory family. (305 aa)
CDX33029.13-oxoadipate enol-lactonase. (270 aa)
pcaC4-carboxymuconolactone decarboxylase. (132 aa)
pcaHProtocatechuate 3,4-dioxygenase beta chain. (250 aa)
pcaGProtocatechuate 3,4-dioxygenase alpha chain. (204 aa)
CDX33041.13-carboxy-cis,cis-muconate cycloisomerase. (353 aa)
pobAP-hydroxybenzoate hydroxylase. (390 aa)
catJ3-oxoadipate CoA-transferase subunit B. (267 aa)
catI3-oxoadipate CoA-transferase subunit A. (285 aa)
pcaC-24-carboxymuconolactone decarboxylase. (125 aa)
CDX45776.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (298 aa)
CDX45778.1Extracellular solute-binding protein family 5. (552 aa)
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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