STRINGSTRING
fixN fixN CDX13499.1 CDX13499.1 CDX13505.1 CDX13505.1 fixP fixP fixS fixS CDX18028.1 CDX18028.1 CDX20482.1 CDX20482.1 CDX21973.1 CDX21973.1 ppk ppk CDX23067.1 CDX23067.1 CDX23075.1 CDX23075.1 nuoN nuoN nuoM nuoM nuoL nuoL nuoK nuoK nqo nqo nuoII nuoII nuoH nuoH nqo-2 nqo-2 CDX29691.1 CDX29691.1 nuoF nuoF CDX29697.1 CDX29697.1 nuoB nuoB nuoA nuoA CDX31040.1 CDX31040.1 ctaA ctaA CDX31720.1 CDX31720.1 CDX32088.1 CDX32088.1 CDX32091.1 CDX32091.1 CDX32094.1 CDX32094.1 CDX32097.1 CDX32097.1 CDX32315.1 CDX32315.1 ctaD ctaD CDX32322.1 CDX32322.1 CDX32324.1 CDX32324.1 CDX34321.1 CDX34321.1 CDX34324.1 CDX34324.1 hyfF hyfF hycD hycD hyfB hyfB CDX34352.1 CDX34352.1 fdxN fdxN cyoD cyoD cyoC cyoC cyoB cyoB cyoA-2 cyoA-2 CDX36523.1 CDX36523.1 rbfA rbfA CDX39479.1 CDX39479.1 ctaD-2 ctaD-2 sdhB sdhB sdhA sdhA CDX40025.1 CDX40025.1 sdhC sdhC cyoA cyoA cyoB-2 cyoB-2 cyoC-2 cyoC-2 CDX41042.1 CDX41042.1 aadA aadA petA petA CDX44121.1 CDX44121.1 nuoD nuoD CDX44563.1 CDX44563.1 cydB cydB cydA cydA CDX45075.1 CDX45075.1 CDX45079.1 CDX45079.1 ctaD-3 ctaD-3 CDX45083.1 CDX45083.1 atpB atpB atpE atpE atpF atpF atpF-2 atpF-2 ctaC ctaC coxA coxA cyoE cyoE ctaG ctaG ctaE ctaE CDX46076.1 CDX46076.1 ppa ppa atpH atpH atpA atpA atpG atpG atpD atpD atpC atpC
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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fixNCytochrome c oxidase subunit 1 homolog, bacteroid; Belongs to the heme-copper respiratory oxidase family. (536 aa)
CDX13499.1Cytochrome c oxidase, cbb3-type, subunit II. (243 aa)
CDX13505.1Nitrogen fixation protein FixQ. (58 aa)
fixPCbb3-type cytochrome c oxidase subunit FixP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex. (287 aa)
fixSNitrogen fixation protein FixS. (51 aa)
CDX18028.1Putative signal peptide protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (135 aa)
CDX20482.1Inorganic pyrophosphatase. (179 aa)
CDX21973.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (81 aa)
ppkPolyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. (731 aa)
CDX23067.1Uncharacterized zinc protease y4wA. (452 aa)
CDX23075.1Uncharacterized zinc protease-like protein y4wB. (464 aa)
nuoNNADH:ubiquinone oxidoreductase, membrane subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family. (478 aa)
nuoMNADH-quinone oxidoreductase chain M (NADH dehydrogenase I, chain M) (NDH-1, chain M); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (501 aa)
nuoLNADH:ubiquinone oxidoreductase, membrane subunit L; Function of homologous gene experimentally demonstrated in an other organism; membrane component. (657 aa)
nuoKNADH-quinone oxidoreductase chain K (NADH dehydrogenase I, chain K) (NDH-1, chain K); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
nqoNADH-quinone oxidoreductase chain 10; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (206 aa)
nuoIINADH-quinone oxidoreductase chain I (NADH dehydrogenase I, chain I) (NDH-1, chain I); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (163 aa)
nuoHNADH-quinone oxidoreductase chain H (NADH dehydrogenase I, chain H) (NDH-1, chain H); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone. (347 aa)
nqo-2NADH-quinone oxidoreductase chain 3; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family. (693 aa)
CDX29691.1NADH-ubiquinone dehydrogenase subunit. (227 aa)
nuoFNADH-quinone oxidoreductase chain F (NADH dehydrogenase I, chain F) (NDH-1, chain F); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (434 aa)
CDX29697.1NADH-quinone oxidoreductase, E subunit. (446 aa)
nuoBFragment of NADH:ubiquinone oxidoreductase, chain C,D (part 1); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (193 aa)
nuoANADH-quinone oxidoreductase chain A (NADH dehydrogenase I, chain A) (NDH-1, chain A); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family. (121 aa)
CDX31040.1FAD-dependent pyridine nucleotide-disulfide oxidoreductase. (421 aa)
ctaAHeme A synthase; Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group; Belongs to the COX15/CtaA family. Type 2 subfamily. (363 aa)
CDX31720.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (306 aa)
CDX32088.1Cytochrome c oxidase subunit III. (201 aa)
CDX32091.1Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (658 aa)
CDX32094.1Cytochrome c oxidase, subunit II. (337 aa)
CDX32097.1Cytochrome c class I. (177 aa)
CDX32315.1Cytochrome c oxidase, subunit II. (317 aa)
ctaDCytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (547 aa)
CDX32322.1Cytochrome c oxidase subunit III. (211 aa)
CDX32324.1Caa(3)-type oxidase, subunit IV. (82 aa)
CDX34321.1NADH ubiquinone oxidoreductase 20 kDa subunit. (179 aa)
CDX34324.1NADH-ubiquinone oxidoreductase chain 49kDa. (511 aa)
hyfFHydrogenase 4, membrane subunit; Function of homologous gene experimentally demonstrated in an other organism; membrane component. (483 aa)
hycDHydrogenase 3, membrane subunit; Function of homologous gene experimentally demonstrated in an other organism; membrane component. (316 aa)
hyfBHydrogenase 4, membrane subunit; Function of homologous gene experimentally demonstrated in an other organism; membrane component. (671 aa)
CDX34352.1KsdD-like steroid dehydrogenase MSMEG_5835. (551 aa)
fdxNFerredoxin-like protein in nif region. (64 aa)
cyoDCytochrome o ubiquinol oxidase subunit IV; Function of homologous gene experimentally demonstrated in an other organism; carrier. (124 aa)
cyoCCytochrome o ubiquinol oxidase subunit III (Ubiquinol oxidase chain C); Function of homologous gene experimentally demonstrated in an other organism; enzyme. (208 aa)
cyoBCytochrome o ubiquinol oxidase, subunit I (Ubiquinol oxidase chain A); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the heme-copper respiratory oxidase family. (668 aa)
cyoA-2Cytochrome o ubiquinol oxidase subunit II. (393 aa)
CDX36523.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (301 aa)
rbfARibosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA. (138 aa)
CDX39479.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (180 aa)
ctaD-2Cytochrome c oxidase subunit 1. (531 aa)
sdhBSuccinate dehydrogenase, Fe-S protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (259 aa)
sdhASuccinate dehydrogenase, flavoprotein subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (611 aa)
CDX40025.1Succinate dehydrogenase, hydrophobic membrane anchor protein. (131 aa)
sdhCSuccinate dehydrogenase, membrane subunit, binds cytochrome b556; Function of homologous gene experimentally demonstrated in an other organism; membrane component. (140 aa)
cyoACytochrome o ubiquinol oxidase subunit II; Function of homologous gene experimentally demonstrated in an other organism; carrier. (291 aa)
cyoB-2Cytochrome o ubiquinol oxidase subunit I; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the heme-copper respiratory oxidase family. (667 aa)
cyoC-2Cytochrome o ubiquinol oxidase subunit III; Function of homologous gene experimentally demonstrated in an other organism; carrier. (222 aa)
CDX41042.1Cytochrome o ubiquinol oxidase subunit IV. (136 aa)
aadAStreptomycin adenyltransferase. (336 aa)
petAFragment of Cytochrome b/c1 (Contains: Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (186 aa)
CDX44121.1NADH dehydogenase-like protein. (231 aa)
nuoDNADH-quinone oxidoreductase chain D (NADH dehydrogenase I, chain D) (NDH-1, chain D); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. (396 aa)
CDX44563.1Cyd operon protein YbgT. (43 aa)
cydBCytochrome d terminal oxidase, subunit II; Function of homologous gene experimentally demonstrated in an other organism; carrier. (390 aa)
cydACytochrome d terminal oxidase, subunit I; Function of homologous gene experimentally demonstrated in an other organism; carrier. (523 aa)
CDX45075.1Conserved exported hypothetical protein; Homologs of previously reported genes of unknown function. (151 aa)
CDX45079.1Cytochrome c oxidase, subunit II. (359 aa)
ctaD-3Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (637 aa)
CDX45083.1Putative cytochrome c oxidase subunit III protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology. (198 aa)
atpBATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family. (253 aa)
atpEATP synthase subunit C, membrane-bound, F0 sector; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (74 aa)
atpFATP synthase subunit b 1; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (193 aa)
atpF-2ATP synthase subunit b 2; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family. (168 aa)
ctaCPutative cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B). (294 aa)
coxACytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B. (549 aa)
cyoEProtoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. (314 aa)
ctaGCytochrome c oxidase assembly protein CtaG; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. (208 aa)
ctaECytochrome c oxidase subunit 3. (293 aa)
CDX46076.1Processing proteinase; Belongs to the peptidase M16 family. (430 aa)
ppaInorganic pyrophosphatase (Pyrophosphate phospho-hydrolase) (PPase); Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions. (177 aa)
atpHATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. (186 aa)
atpAATP synthase subunit alpha, membrane-bound, F1 sector; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. (509 aa)
atpGF1 sector of membrane-bound ATP synthase, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. (294 aa)
atpDATP synthase subunit beta, membrane-bound, F1 sector; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. (525 aa)
atpCF1 sector of membrane-bound ATP synthase, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (135 aa)
Your Current Organism:
Mesorhizobium plurifarium
NCBI taxonomy Id: 69974
Other names: CIP 105884, JCM 21566, LMG 11892, LMG:11892, M. plurifarium, Mesorhizobium sp. LMG 11892, NBRC 102498, Rhizobium sp. LMG 7836, Rhizobium sp. LMG 7854
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