STRINGSTRING
uxaC uxaC ADO46882.1 ADO46882.1 ADO46998.1 ADO46998.1 ADO46999.1 ADO46999.1 ADO47000.1 ADO47000.1 kduI kduI ADO47157.1 ADO47157.1 uxuA uxuA uxaB uxaB ADO48568.1 ADO48568.1 ADO48572.1 ADO48572.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
uxaCKEGG: ctu:Ctu_04620 glucuronate isomerase; PFAM: Glucuronate isomerase. (470 aa)
ADO46882.1KEGG: ent:Ent638_3545 D-altronate dehydratase; PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; SAF domain protein. (495 aa)
ADO46998.1KEGG: ypy:YPK_2496 TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; PFAM: Extracellular solute-binding protein, family 7. (325 aa)
ADO46999.1PFAM: Tripartite ATP-independent periplasmic transporter DctQ component; KEGG: pct:PC1_0343 tripartite ATP-independent periplasmic transporter DctQ component. (182 aa)
ADO47000.1KEGG: cko:CKO_03565 hypothetical protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit. (429 aa)
kduI4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family. (278 aa)
ADO47157.1KEGG: cko:CKO_04219 2-deoxy-D-gluconate 3-dehydrogenase; TIGRFAM: 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR. (253 aa)
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (396 aa)
uxaBPFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: sfv:SFV_1580 altronate oxidoreductase; Belongs to the mannitol dehydrogenase family. UxaB subfamily. (483 aa)
ADO48568.1PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: enc:ECL_02178 fructuronate reductase. (488 aa)
ADO48572.1PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: cko:CKO_01575 hypothetical protein. (404 aa)
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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