STRINGSTRING
patA patA ADO47030.1 ADO47030.1 glaH glaH lhgD lhgD ADO47148.1 ADO47148.1 ADO47155.1 ADO47155.1 ADO47463.1 ADO47463.1 fadJ fadJ ADO47754.1 ADO47754.1 ADO47756.1 ADO47756.1 ADO47757.1 ADO47757.1 patD patD ADO48668.1 ADO48668.1 ADO49058.1 ADO49058.1 ADO49346.1 ADO49346.1 ADO49763.1 ADO49763.1 ADO49792.1 ADO49792.1 ADO49853.1 ADO49853.1 ADO50027.1 ADO50027.1 fadB fadB
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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patAPutrescine aminotransferase; Catalyzes the aminotransferase reaction from putrescine to 2- oxoglutarate, leading to glutamate and 4-aminobutanal, which spontaneously cyclizes to form 1-pyrroline. This is the first step in one of two pathways for putrescine degradation, where putrescine is converted into 4-aminobutanoate (gamma-aminobutyrate or GABA) via 4- aminobutanal. Also functions as a cadaverine transaminase in a a L- lysine degradation pathway to succinate that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. (459 aa)
ADO47030.1PFAM: Aldehyde Dehydrogenase; KEGG: reu:Reut_A1903 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (471 aa)
glaHProtein of unknown function CsiD; Acts as an alpha-ketoglutarate-dependent dioxygenase catalyzing hydroxylation of glutarate (GA) to L-2-hydroxyglutarate (L2HG). Functions in a L-lysine degradation pathway that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. (325 aa)
lhgDFAD dependent oxidoreductase; Catalyzes the dehydrogenation of L-2-hydroxyglutarate (L2HG) to alpha-ketoglutarate and couples to the respiratory chain by feeding electrons from the reaction into the membrane quinone pool. Functions in a L-lysine degradation pathway that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. Reaction=(S)-2-hydroxyglutarate + a quinone = 2-oxoglutarate + a quinol; Xref=Rhea:RHEA:58664, ChEBI:CHEBI:16782, ChEBI:CHEBI:16810, ChEBI:CHEBI:24646, ChEBI:CHEBI:132124; PhysiologicalDirection=left-to-right; Xref=Rhea:RHEA:58665; Belongs to the L2HGDH family. (425 aa)
ADO47148.1KEGG: cko:CKO_04008 succinate-semialdehyde dehydrogenase I; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family. (482 aa)
ADO47155.1TIGRFAM: acetyl-CoA acetyltransferase; KEGG: kpu:KP1_4545 acetyl-CoA acetyltransferase; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
ADO47463.1KEGG: kva:Kvar_3879 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein. (714 aa)
fadJFatty acid oxidation complex, alpha subunit FadJ; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (715 aa)
ADO47754.1TIGRFAM: acetyl-CoA acetyltransferase; KEGG: cko:CKO_00545 hypothetical protein; PFAM: Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
ADO47756.1TIGRFAM: 3-oxoacid CoA-transferase, B subunit; KEGG: cko:CKO_00547 hypothetical protein; PFAM: coenzyme A transferase. (216 aa)
ADO47757.1TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: cko:CKO_00548 acetyl-CoA:acetoacetyl-CoA transferase subunit alpha; PFAM: coenzyme A transferase. (220 aa)
patD1-pyrroline dehydrogenase; Catalyzes the oxidation 4-aminobutanal (gamma- aminobutyraldehyde) to 4-aminobutanoate (gamma-aminobutyrate or GABA). This is the second step in one of two pathways for putrescine degradation, where putrescine is converted into 4-aminobutanoate via 4- aminobutanal. Also functions as a 5-aminopentanal dehydrogenase in a a L-lysine degradation pathway to succinate that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate. (475 aa)
ADO48668.1PFAM: Enoyl-CoA hydratase/isomerase; KEGG: kpu:KP1_2477 enoyl-CoA hydratase-isomerase; Belongs to the enoyl-CoA hydratase/isomerase family. (255 aa)
ADO49058.1KEGG: kva:Kvar_3367 succinic semialdehyde dehydrogenase; TIGRFAM: succinic semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family. (482 aa)
ADO49346.12-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (401 aa)
ADO49763.1KEGG: kpu:KP1_1410 lysine decarboxylase 1; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein. (714 aa)
ADO49792.1Lysine decarboxylase; KEGG: cko:CKO_03180 hypothetical protein; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein. (712 aa)
ADO49853.1KEGG: sed:SeD_A0167 dihydrolipoamide dehydrogenase; TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region. (474 aa)
ADO50027.1PFAM: Malate/L-lactate dehydrogenase; KEGG: kva:Kvar_4453 malate/L-lactate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family. (339 aa)
fadBFatty oxidation complex, alpha subunit FadB; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (729 aa)
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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