STRINGSTRING
PECL_699 PECL_699 PECL_71 PECL_71 PECL_857 PECL_857 oppC oppC oppB oppB PECL_1446 PECL_1446 PECL_1447 PECL_1447 PECL_1525 PECL_1525 PECL_1700 PECL_1700 PECL_1701 PECL_1701 opuCD opuCD opuCB opuCB PECL_400 PECL_400 pstC pstC pstA pstA metI metI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PECL_699Amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein. (216 aa)
PECL_71Substrate binding domain of ABC-type glycine betaine transport system family protein. (509 aa)
PECL_857Amino acid ABC transporter, permease/substrate-binding protein. (492 aa)
oppCOligopeptide/dipeptide ABC transporter, permease protein OppC. (340 aa)
oppBOligopeptide/dipeptide ABC transporter, permease protein OppB. (309 aa)
PECL_1446Amino acid ABC transporter, permease protein (His/Glu/Gln/Arg/opine family). (218 aa)
PECL_1447Amino acid ABC transporter, permease protein (His/Glu/Gln/Arg/opine family). (216 aa)
PECL_1525D-methionine ABC transporter, permease protein. (223 aa)
PECL_1700Multiple sugar ABC transporter, permease protein 1. (270 aa)
PECL_1701Multiple sugar ABC transporter, permease protein 2. (286 aa)
opuCDGlycine betaine/carnitine/choline ABC transporter, permease protein OpuCD. (221 aa)
opuCBGlycine betaine/carnitine/choline ABC transporter, permease protein OpuCB. (210 aa)
PECL_400Glutamine ABC transporter, permease/substrate-binding protein. (485 aa)
pstCPhosphate ABC transporter, permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (306 aa)
pstAPhosphate ABC transporter, permease protein PstA. (295 aa)
metIMethionine import system permease protein metI. (229 aa)
Your Current Organism:
Pediococcus claussenii
NCBI taxonomy Id: 701521
Other names: P. claussenii ATCC BAA-344, Pediococcus claussenii ATCC BAA-344, Pediococcus claussenii ATCC str. BAA-344, Pediococcus claussenii ATCC strain BAA-344
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