(16 nodes) Organellar small ribosomal subunit network (Acyrthosiphon pisum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ACYPI002879	ACYPI002879 protein. (134 aa)
	ACYPI000999	ACYPI000999 protein. (231 aa)
	ACYPI007817	ACYPI007817 protein. (183 aa)
	ACYPI007920	ACYPI007920 protein. (169 aa)
	ACYPI007219	ACYPI007219 protein; Belongs to the universal ribosomal protein uS12 family. (137 aa)
	J9JMT4_ACYPI	Uncharacterized protein. (339 aa)
	J9JR52_ACYPI	Uncharacterized protein. (376 aa)
	J9JVU5_ACYPI	Uncharacterized protein. (201 aa)
	J9K252_ACYPI	MRP-S28 domain-containing protein. (334 aa)
	J9K3K6_ACYPI	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family. (267 aa)
	J9K5K6_ACYPI	Uncharacterized protein. (438 aa)
	J9K5M6_ACYPI	L51_S25_CI-B8 domain-containing protein. (167 aa)
	J9K9E4_ACYPI	Uncharacterized protein. (138 aa)
	J9K9P7_ACYPI	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family. (454 aa)
	J9KAI1_ACYPI	Uncharacterized protein. (222 aa)
	J9KB06_ACYPI	Uncharacterized protein. (264 aa)

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACYPI000999	ACYPI002879	C4WVL9	C4WV81	ACYPI000999 protein.	ACYPI002879 protein.	0.999
ACYPI000999	ACYPI007219	C4WVL9	C4WX29	ACYPI000999 protein.	ACYPI007219 protein; Belongs to the universal ribosomal protein uS12 family.	0.999
ACYPI000999	ACYPI007817	C4WVL9	C4WW21	ACYPI000999 protein.	ACYPI007817 protein.	0.998
ACYPI000999	ACYPI007920	C4WVL9	C4WX26	ACYPI000999 protein.	ACYPI007920 protein.	0.988
ACYPI000999	J9JMT4_ACYPI	C4WVL9	J9JMT4	ACYPI000999 protein.	Uncharacterized protein.	0.989
ACYPI000999	J9JR52_ACYPI	C4WVL9	J9JR52	ACYPI000999 protein.	Uncharacterized protein.	0.998
ACYPI000999	J9JVU5_ACYPI	C4WVL9	J9JVU5	ACYPI000999 protein.	Uncharacterized protein.	0.998
ACYPI000999	J9K252_ACYPI	C4WVL9	J9K252	ACYPI000999 protein.	MRP-S28 domain-containing protein.	0.992
ACYPI000999	J9K3K6_ACYPI	C4WVL9	J9K3K6	ACYPI000999 protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.	0.999
ACYPI000999	J9K5K6_ACYPI	C4WVL9	J9K5K6	ACYPI000999 protein.	Uncharacterized protein.	0.989
ACYPI000999	J9K5M6_ACYPI	C4WVL9	J9K5M6	ACYPI000999 protein.	L51_S25_CI-B8 domain-containing protein.	0.995
ACYPI000999	J9K9E4_ACYPI	C4WVL9	J9K9E4	ACYPI000999 protein.	Uncharacterized protein.	0.999
ACYPI000999	J9K9P7_ACYPI	C4WVL9	J9K9P7	ACYPI000999 protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
ACYPI000999	J9KAI1_ACYPI	C4WVL9	J9KAI1	ACYPI000999 protein.	Uncharacterized protein.	0.987
ACYPI000999	J9KB06_ACYPI	C4WVL9	J9KB06	ACYPI000999 protein.	Uncharacterized protein.	0.999
ACYPI002879	ACYPI000999	C4WV81	C4WVL9	ACYPI002879 protein.	ACYPI000999 protein.	0.999
ACYPI002879	ACYPI007219	C4WV81	C4WX29	ACYPI002879 protein.	ACYPI007219 protein; Belongs to the universal ribosomal protein uS12 family.	0.999
ACYPI002879	ACYPI007817	C4WV81	C4WW21	ACYPI002879 protein.	ACYPI007817 protein.	0.999
ACYPI002879	ACYPI007920	C4WV81	C4WX26	ACYPI002879 protein.	ACYPI007920 protein.	0.997
ACYPI002879	J9JMT4_ACYPI	C4WV81	J9JMT4	ACYPI002879 protein.	Uncharacterized protein.	0.996