(32 nodes) Structural constituent of ribosome network (Ostreococcus tauri)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LX34	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family. (104 aa)
	A0A090LYL8	Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. (157 aa)
	A0A090LZP7	Ribosomal protein S3, eukaryotic/archaeal. (230 aa)
	A0A090M2L4	Ribosomal protein L2, bacterial/organellar-type. (344 aa)
	A0A090M4E6	Ribosomal protein S6. (126 aa)
	A0A090M5Z4	Ribosomal protein S5 domain 2-type fold,subgroup. (256 aa)
	A0A090M6F3	Ribosomal protein L28. (136 aa)
	A0A090M6F6	Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family. (214 aa)
	A0A090M6I3	Ribosomal protein L7/L12, C-terminal. (165 aa)
	A0A090M7K5	Ribosomal protein L21. (176 aa)
	A0A090MDG2	Ribosomal protein L17. (105 aa)
	A0A090N4C6	Ribosomal protein L4/L1e. (331 aa)
	A0A090N4J1	Ribosomal protein S19 conserved site; Belongs to the universal ribosomal protein uS19 family. (151 aa)
	A0A096P7B8	Ribosomal protein L30, ferredoxin-like fold domain. (237 aa)
	A0A096P8Y4	Ribosomal protein S16 domain. (113 aa)
	A0A096P9D0	Ribosomal protein L19. (191 aa)
	A0A096PAT4	Ribosomal protein L9, C-terminal. (203 aa)
	A0A096PAT9	Ribosomal protein L19. (227 aa)
	A0A096PB63	Ribosomal protein S17. (123 aa)
	A0A096PBL2	Ribosomal protein L33, conserved site. (60 aa)
	A0A096PBW6	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (110 aa)
	Q00RY2_OSTTA	Translation elongation/initiation factor/Ribosomal, beta-barrel; Belongs to the universal ribosomal protein uL3 family. (312 aa)
	Q00T37_OSTTA	Ribosomal protein L15, bacterial-type. (355 aa)
	Q00VZ3_OSTTA	50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. (109 aa)
	Q00XJ7_OSTTA	Ribosomal protein S16 domain. (105 aa)
	Rps2	Ribosomal protein S2. (208 aa)
	Rps14	Ribosomal protein S14. (99 aa)
	Rps8	Ribosomal protein S8; Belongs to the universal ribosomal protein uS8 family. (124 aa)
	rpl20	50S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (111 aa)
	rps7	30S ribosomal protein S7, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. (156 aa)
	rps12	30S ribosomal protein S12, chloroplastic; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits (By similarity). (124 aa)
	rpl36	50S ribosomal protein L36, chloroplastic. (37 aa)

Your Current Organism:

Ostreococcus tauri

NCBI taxonomy Id: 70448
Other names: O. tauri

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A090LX34	A0A090LYL8	A0A090LX34	A0A090LYL8	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.	0.916
A0A090LX34	A0A090LZP7	A0A090LX34	A0A090LZP7	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein S3, eukaryotic/archaeal.	0.971
A0A090LX34	A0A090M2L4	A0A090LX34	A0A090M2L4	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L2, bacterial/organellar-type.	0.894
A0A090LX34	A0A090M4E6	A0A090LX34	A0A090M4E6	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein S6.	0.972
A0A090LX34	A0A090M5Z4	A0A090LX34	A0A090M5Z4	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein S5 domain 2-type fold,subgroup.	0.796
A0A090LX34	A0A090M6F3	A0A090LX34	A0A090M6F3	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L28.	0.917
A0A090LX34	A0A090M6F6	A0A090LX34	A0A090M6F6	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L13; Belongs to the universal ribosomal protein uL13 family.	0.886
A0A090LX34	A0A090M6I3	A0A090LX34	A0A090M6I3	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L7/L12, C-terminal.	0.912
A0A090LX34	A0A090M7K5	A0A090LX34	A0A090M7K5	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L21.	0.908
A0A090LX34	A0A090MDG2	A0A090LX34	A0A090MDG2	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L17.	0.916
A0A090LX34	A0A090N4C6	A0A090LX34	A0A090N4C6	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L4/L1e.	0.872
A0A090LX34	A0A090N4J1	A0A090LX34	A0A090N4J1	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein S19 conserved site; Belongs to the universal ribosomal protein uS19 family.	0.975
A0A090LX34	A0A096P7B8	A0A090LX34	A0A096P7B8	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L30, ferredoxin-like fold domain.	0.975
A0A090LX34	A0A096P8Y4	A0A090LX34	A0A096P8Y4	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein S16 domain.	0.906
A0A090LX34	A0A096P9D0	A0A090LX34	A0A096P9D0	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L19.	0.902
A0A090LX34	A0A096PAT4	A0A090LX34	A0A096PAT4	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L9, C-terminal.	0.798
A0A090LX34	A0A096PAT9	A0A090LX34	A0A096PAT9	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L19.	0.902
A0A090LX34	A0A096PB63	A0A090LX34	A0A096PB63	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein S17.	0.882
A0A090LX34	A0A096PBL2	A0A090LX34	A0A096PBL2	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	Ribosomal protein L33, conserved site.	0.956
A0A090LX34	A0A096PBW6	A0A090LX34	A0A096PBW6	Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.	50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.903