37 items (Ostreococcus tauri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090LX71	Anticodon-binding. (418 aa)
	A0A090LZE9	P-loop containing nucleoside triphosphate hydrolase. (159 aa)
	A0A090M4D9	G-protein beta WD-40 repeat. (433 aa)
	A0A090M4G7	Surfeit locus 6. (380 aa)
	A0A090M5J1	Nucleotide-binding, alpha-beta plait. (889 aa)
	A0A090M5Q6	Nucleotide-binding, alpha-beta plait. (299 aa)
	A0A090M674	Ribosomal protein L1, 2-layer alpha/beta-sandwich. (283 aa)
	A0A090M6K6	Guanine nucleotide-binding protein-like 3,N-terminal domain. (597 aa)
	A0A090M6T0	G-protein beta WD-40 repeat. (462 aa)
	A0A090M7E5	Protein MAK16 homolog; Belongs to the MAK16 family. (224 aa)
	A0A090M7M8	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (185 aa)
	A0A090M7R6	Nucleolar complex-associated. (910 aa)
	A0A090M7X8	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily. (665 aa)
	A0A090M8F4	Armadillo-type fold. (810 aa)
	A0A090MBQ3	Armadillo-type fold. (740 aa)
	A0A090MCX8	Eukaryotic rRNA processing. (278 aa)
	A0A090N2Q3	P-loop containing nucleoside triphosphate hydrolase. (454 aa)
	A0A090N404	Helicase, C-terminal. (630 aa)
	A0A090N4V8	Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (714 aa)
	A0A096P7X6	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits. (930 aa)
	A0A096P838	Helicase, C-terminal. (910 aa)
	A0A096P8C8	Quinonprotein alcohol dehydrogenase-like superfamily. (429 aa)
	A0A096P8M8	Brix domain. (319 aa)
	A0A096P8R1	Brix domain. (417 aa)
	A0A096P999	Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. (767 aa)
	A0A096PB04	Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (348 aa)
	A0A096PBJ5	Armadillo-type fold. (1122 aa)
	A0A096PBM9	Nucleolar, Nop52. (505 aa)
	Q00SZ7_OSTTA	Uncharacterized protein. (268 aa)
	Q00T39_OSTTA	Ribosomal protein S8e/ribosomal biogenesis NSA2. (260 aa)
	Q00TM0_OSTTA	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (254 aa)
	Q01AF2_OSTTA	Ribosome biogenesis protein Nop16. (201 aa)
	Q01BX7_OSTTA	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (427 aa)
	Q01CN9_OSTTA	Ribosome biogenesis protein BRX1. (335 aa)
	Q01F60_OSTTA	BOP1, N-terminal domain. (580 aa)
	Q01F89_OSTTA	Ribosomal protein L24e, conserved site. (164 aa)
	Q01FJ1_OSTTA	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (667 aa)

Your Current Organism:

Ostreococcus tauri

NCBI taxonomy Id: 70448
Other names: O. tauri

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A090LX71	A0A090LZE9	A0A090LX71	A0A090LZE9	Anticodon-binding.	P-loop containing nucleoside triphosphate hydrolase.	0.935
A0A090LX71	A0A090M4D9	A0A090LX71	A0A090M4D9	Anticodon-binding.	G-protein beta WD-40 repeat.	0.984
A0A090LX71	A0A090M4G7	A0A090LX71	A0A090M4G7	Anticodon-binding.	Surfeit locus 6.	0.949
A0A090LX71	A0A090M5J1	A0A090LX71	A0A090M5J1	Anticodon-binding.	Nucleotide-binding, alpha-beta plait.	0.858
A0A090LX71	A0A090M5Q6	A0A090LX71	A0A090M5Q6	Anticodon-binding.	Nucleotide-binding, alpha-beta plait.	0.996
A0A090LX71	A0A090M674	A0A090LX71	A0A090M674	Anticodon-binding.	Ribosomal protein L1, 2-layer alpha/beta-sandwich.	0.944
A0A090LX71	A0A090M6K6	A0A090LX71	A0A090M6K6	Anticodon-binding.	Guanine nucleotide-binding protein-like 3,N-terminal domain.	0.935
A0A090LX71	A0A090M6T0	A0A090LX71	A0A090M6T0	Anticodon-binding.	G-protein beta WD-40 repeat.	0.731
A0A090LX71	A0A090M7E5	A0A090LX71	A0A090M7E5	Anticodon-binding.	Protein MAK16 homolog; Belongs to the MAK16 family.	0.996
A0A090LX71	A0A090M7M8	A0A090LX71	A0A090M7M8	Anticodon-binding.	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.	0.989
A0A090LX71	A0A090M7R6	A0A090LX71	A0A090M7R6	Anticodon-binding.	Nucleolar complex-associated.	0.880
A0A090LX71	A0A090M7X8	A0A090LX71	A0A090M7X8	Anticodon-binding.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.879
A0A090LX71	A0A090M8F4	A0A090LX71	A0A090M8F4	Anticodon-binding.	Armadillo-type fold.	0.986
A0A090LX71	A0A090MBQ3	A0A090LX71	A0A090MBQ3	Anticodon-binding.	Armadillo-type fold.	0.856
A0A090LX71	A0A090MCX8	A0A090LX71	A0A090MCX8	Anticodon-binding.	Eukaryotic rRNA processing.	0.993
A0A090LX71	A0A090N2Q3	A0A090LX71	A0A090N2Q3	Anticodon-binding.	P-loop containing nucleoside triphosphate hydrolase.	0.879
A0A090LX71	A0A090N404	A0A090LX71	A0A090N404	Anticodon-binding.	Helicase, C-terminal.	0.878
A0A090LX71	A0A090N4V8	A0A090LX71	A0A090N4V8	Anticodon-binding.	Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.	0.769
A0A090LX71	A0A096P7X6	A0A090LX71	A0A096P7X6	Anticodon-binding.	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.	0.950
A0A090LX71	A0A096P838	A0A090LX71	A0A096P838	Anticodon-binding.	Helicase, C-terminal.	0.588