(46 nodes) Regulation of post-embryonic development network (Ostreococcus tauri)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A090MAR4	XAP5 protein. (246 aa)
	A0A090MAJ3	Zinc finger, RING/FYVE/PHD-type. (458 aa)
	A0A090M3P1	Nucleotide-binding, alpha-beta plait. (411 aa)
	A0A090M1V9	Ubiquitin-conjugating enzyme, active site; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	A0A090LZV0	Armadillo-type fold. (1143 aa)
	A0A090LZS5	C2 calcium-dependent membrane targeting. (1069 aa)
	A0A090LYZ4	JmjC domain. (481 aa)
	A0A090LYE5	RNA polymerase II-associated, Paf1. (417 aa)
	A0A090LYD7	JmjC domain. (434 aa)
	A0A090M8H6	Acyl-CoA N-acyltransferase. (429 aa)
	A0A090M7H2	JmjC domain. (407 aa)
	A0A090M5U5	RNA polymerase II accessory factor, Cdc73. (448 aa)
	A0A090M5T7	Zinc finger, HIT-type. (207 aa)
	A0A090M5T0	Tetratricopeptide repeat. (2243 aa)
	A0A090M526	AMP-dependent synthetase/ligase. (1494 aa)
	Q5IFM9_OSTTA	CONSTANS-like protein. (406 aa)
	Q01GR7_OSTTA	K Homology domain, type 1. (402 aa)
	Q01G54_OSTTA	Basic-leucine zipper domain. (150 aa)
	Q01FP9_OSTTA	WD40 repeat. (635 aa)
	Q01EZ2_OSTTA	Arginine-tRNA-protein transferase, C-terminal. (404 aa)
	Q01E52_OSTTA	JmjC domain. (349 aa)
	Q01DD2_OSTTA	WD40/YVTN repeat-like-containing domain. (446 aa)
	Q01CE1_OSTTA	Tetratricopeptide repeat. (322 aa)
	A0A090M4Z0	G-protein beta WD-40 repeat. (320 aa)
	Q017D6_OSTTA	Myb-like domain. (540 aa)
	Q014P6_OSTTA	JmjC domain. (275 aa)
	Q00SP3_OSTTA	Serine/threonine-protein phosphatase. (307 aa)
	A0A096PBK6	Plus-3. (565 aa)
	A0A096P9W2	Cryptochrome/DNA photolyase, class 1. (698 aa)
	A0A096P9U6	SLC41 divalent cation transporters, integral membrane domain. (444 aa)
	A0A096P9S0	Uncharacterized protein. (272 aa)
	A0A096P9E3	Leo1-like protein. (330 aa)
	A0A096P8U9	HAS subgroup. (764 aa)
	A0A096P8N2	YEATS. (204 aa)
	A0A096P8M9	Zinc finger, CW-type. (851 aa)
	A0A096P8J3	Phosphoribosyltransferase C-terminal. (212 aa)
	A0A096P887	Peptidyl-prolyl cis-trans isomerase. (119 aa)
	A0A096P7Q5	Chlorophyll a/b binding protein domain. (151 aa)
	A0A096P7H6	Chlorophyll a/b binding protein domain. (284 aa)
	A0A090N375	SWIB/MDM2 domain. (390 aa)
	A0A090N374	Tetratricopeptide, MLP1/MLP2-like. (1758 aa)
	A0A090N346	Tetratricopeptide repeat. (720 aa)
	A0A090N2T8	JmjC domain. (398 aa)
	A0A090N2T3	AMP-dependent synthetase/ligase. (1718 aa)
	A0A090MC62	Nucleotide-binding, alpha-beta plait. (445 aa)
	A0A090MAY9	Winged helix-turn-helix DNA-binding domain. (395 aa)

Your Current Organism:

Ostreococcus tauri

NCBI taxonomy Id: 70448
Other names: O. tauri

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A090LYD7	Q014P6_OSTTA	A0A090LYD7	Q014P6	JmjC domain.	JmjC domain.	0.455
A0A090LYE5	A0A090M4Z0	A0A090LYE5	A0A090M4Z0	RNA polymerase II-associated, Paf1.	G-protein beta WD-40 repeat.	0.742
A0A090LYE5	A0A090M5U5	A0A090LYE5	A0A090M5U5	RNA polymerase II-associated, Paf1.	RNA polymerase II accessory factor, Cdc73.	0.999
A0A090LYE5	A0A090N346	A0A090LYE5	A0A090N346	RNA polymerase II-associated, Paf1.	Tetratricopeptide repeat.	0.999
A0A090LYE5	A0A096P9E3	A0A090LYE5	A0A096P9E3	RNA polymerase II-associated, Paf1.	Leo1-like protein.	0.999
A0A090LYE5	A0A096PBK6	A0A090LYE5	A0A096PBK6	RNA polymerase II-associated, Paf1.	Plus-3.	0.992
A0A090M1V9	A0A096P8U9	A0A090M1V9	A0A096P8U9	Ubiquitin-conjugating enzyme, active site; Belongs to the ubiquitin-conjugating enzyme family.	HAS subgroup.	0.504
A0A090M3P1	Q01GR7_OSTTA	A0A090M3P1	Q01GR7	Nucleotide-binding, alpha-beta plait.	K Homology domain, type 1.	0.462
A0A090M4Z0	A0A090LYE5	A0A090M4Z0	A0A090LYE5	G-protein beta WD-40 repeat.	RNA polymerase II-associated, Paf1.	0.742
A0A090M4Z0	A0A090M5U5	A0A090M4Z0	A0A090M5U5	G-protein beta WD-40 repeat.	RNA polymerase II accessory factor, Cdc73.	0.605
A0A090M4Z0	A0A090N346	A0A090M4Z0	A0A090N346	G-protein beta WD-40 repeat.	Tetratricopeptide repeat.	0.715
A0A090M4Z0	A0A096P9E3	A0A090M4Z0	A0A096P9E3	G-protein beta WD-40 repeat.	Leo1-like protein.	0.726
A0A090M4Z0	A0A096PBK6	A0A090M4Z0	A0A096PBK6	G-protein beta WD-40 repeat.	Plus-3.	0.600
A0A090M526	A0A090N374	A0A090M526	A0A090N374	AMP-dependent synthetase/ligase.	Tetratricopeptide, MLP1/MLP2-like.	0.412
A0A090M5T7	A0A096P8N2	A0A090M5T7	A0A096P8N2	Zinc finger, HIT-type.	YEATS.	0.683
A0A090M5U5	A0A090LYE5	A0A090M5U5	A0A090LYE5	RNA polymerase II accessory factor, Cdc73.	RNA polymerase II-associated, Paf1.	0.999
A0A090M5U5	A0A090M4Z0	A0A090M5U5	A0A090M4Z0	RNA polymerase II accessory factor, Cdc73.	G-protein beta WD-40 repeat.	0.605
A0A090M5U5	A0A090N346	A0A090M5U5	A0A090N346	RNA polymerase II accessory factor, Cdc73.	Tetratricopeptide repeat.	0.999
A0A090M5U5	A0A096P8M9	A0A090M5U5	A0A096P8M9	RNA polymerase II accessory factor, Cdc73.	Zinc finger, CW-type.	0.467
A0A090M5U5	A0A096P9E3	A0A090M5U5	A0A096P9E3	RNA polymerase II accessory factor, Cdc73.	Leo1-like protein.	0.999