STRINGSTRING
PH0138 PH0138 PH0272 PH0272 PH0275 PH0275 PH0676 PH0676 PH0678 PH0678 PH0682 PH0682 PH0684 PH0684 PH0685 PH0685 PH0766 PH0766 PH0782 PH0782 PH1306 PH1306 PH1423 PH1423 PH1501 PH1501 PH1517 PH1517 PH1739 PH1739 PH1788 PH1788 PH1789 PH1789 PH1928 PH1928
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PH0138466aa long hypothetical 4-aminobutyrate aminotransferase; Amino-acid racemase able to utilize a broad range of substrates. Can use Met, Leu, Phe, Ala, Ser, Ile, Val, Trp, Tyr and Thr. Is mostly active with Phe, Leu, Met and Tyr, followed by Ile, Thr and Trp. Has weaker activity with Val, Ser and Ala. Shows no activity toward Pro, Asp, Glu, Arg, His, Gln and Asn. (466 aa)
PH0272136aa long hypothetical protein; Similar to Swiss_Prot:P54540 percent identity: 44.186 in 130aa; owl:CED20305 percent identity: 37.600 in 126aa; Belongs to the methylmalonyl-CoA epimerase family. (136 aa)
PH0275147aa long hypothetical methylmalony-CoA mutase; Similar to owl:AF008569 percent identity: 60.000 in 114aa. (147 aa)
PH0676389aa long hypothetical nonspecific lipid-transfer protein (acethyl CoA synthetase); Similar to owl:PFPORVOR3 percent identity: 91.969 in 386aa; PIR:D64493 percent identity: 47.354 in 387aa. (389 aa)
PH0678185aa long hypothetical ferredoxin oxidoreductase gamma subunit; Similar to owl:PFPORVOR5 percent identity: 90.270 in 185aa; PIR:F64333 percent identity: 65.698 in 179aa; owl:TMPMRFDNA2 percent identity: 44.000 in 177aa. (185 aa)
PH0682108aa long hypothetical ferredoxin oxidoreductase delta subunit; Similar to owl:PFPORVOR9 percent identity: 95.238 in 105aa; owl:PFPORVOR6 percent identity: 62.667 in 75aa; PIR:E64333 percent identity: 58.824 in 85aa. motif=4Fe-4S ferredoxins, iron-sulfur binding region signature. (108 aa)
PH0684398aa long hypothetical ferredoxin oxidoreductase alpha-2 subunit; Similar to owl:PFPORVOR10 percent identity:88.101 in 395aa; PIR:D64333 percent identity:57.377 in 373aa; owl:PFPORVOR7 percent identity:51.399 in 396aa. (398 aa)
PH0685334aa long hypothetical ferredoxin oxidoreductase beta subunit; Similar to owl:PFPORVOR11 percent identity: 92.145 in 331aa; PIR:C64333 percent identity: 62.821 in 252aa; owl:PFPORVOR8 percent identity: 55.187 in 257aa. motif=prokaryotic membrane lipoprotein lipid attachment site. (334 aa)
PH0766457aa long hypothetical protein; Similar to PIR:F64373 percent identity: 47.356 in 441aa; owl:ECOK12RIII17 percent identity: 34.943 in 454aa; owl:ECAE00034410 percent identity: 34.943 in 454aa. (457 aa)
PH0782474aa long hypothetical 4-aminobutyrate aminotransferase; Catalyzes the interconversion of L-alanine and D-alanine, and L-serine and D-serine. Has weak activity with valine and threonine. (474 aa)
PH1306563aa long hypothetical methylmalonyl-CoA mutase; Similar to Swiss_Prot:P22033 percent identity:53.455 in 493aa; owl:CEZK1058 percent identity:52.998 in 521aa; Swiss_Prot:P16332 percent identity:52.642 in 493aa. (563 aa)
PH1423454aa long hypothetical 4-aminobutyrate aminotransferase; Similar to owl:D5045389 percent identity: 38.539 in 406aa; Swiss_Prot:P30268 percent identity: 39.552 in 409aa; Swiss_Prot:P40829 percent identity: 39.646 in 409aa. motif=aminotransferases class-III pyridoxal-phosphate attachment site; ATP/GTP-binding s; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (454 aa)
PH1501438aa long hypothetical aminotransferase; Similar to owl:D5045389 percent identity: 38.287 in 401aa; Swiss_Prot:P30268 percent identity: 36.409 in 409aa; Swiss_Prot:P22256 percent identity: 36.750 in 409aa. motif=aminotransferases class-III pyridoxal-phosphate attachment site; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (438 aa)
PH1517460aa long hypothetical protein; Similar to PIR:F64373 percent identity: 47.204 in 459aa; owl:ECOK12RIII17 percent identity: 33.028 in 455aa; owl:ECAE00034410 percent identity: 33.028 in 455aa. (460 aa)
PH1739212aa long hypothetical protein; Similar to PIR:F64373 percent identity: 46.023 in 180aa. (212 aa)
PH1788238aa long hypothetical protein; Similar to PIR:F64373 percent identity: 49.550 in 227aa. (238 aa)
PH1789472aa long hypothetical protein; Similar to PIR:F64373 percent identity: 45.372 in 459aa; owl:ECOK12RIII17 percent identity: 30.275 in 459aa; owl:ECAE00034410 percent identity: 30.275 in 459aa. (472 aa)
PH1928466aa long hypothetical protein; Similar to PIR:F64373 percent identity: 43.213 in 462aa; owl:ECOK12RIII17 percent identity: 34.959 in 393aa; owl:ECAE00034410 percent identity: 34.959 in 393aa. (466 aa)
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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