STRINGSTRING
crtX crtX crtI crtI crtB crtB crtZ crtZ aspH aspH miaA miaA idi idi crtE crtE
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
crtXCrtX; Zeaxanthin glucosyl transferase; Similar to >sp|P21686.1|CRTX_PANAN RecName: Full=Zeaxanthin glucosyltransferas,CRTX_PANAN RecName: Full=Zeaxanthin glucosyltransferas(NCBI: P21686.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown; Belongs to the UDP-glycosyltransferase family. (431 aa)
crtICrtI; Phytoene dehydrogenase; Similar to >sp|P21685.1|CRTI_PANAN RecName: Full=Phytoene dehydrogenase; AltName: Full=Phytoene desaturas,CRTI_PANAN RecName: Full=Phytoene dehydrogenase; AltName: Full=Phytoene desaturas(NCBI: P21685.1); COG: Secondary metabolites biosynthesis, transport and catabolism; Subcellular localization as predicted by Psort 2.0: Unknown. (492 aa)
crtBCrtB; Phytoene synthase; Similar to >sp|P21683.2|CRTB_PANAN RecName: Full=Phytoene synthas,CRTB_PANAN RecName: Full=Phytoene synthas(NCBI: P21683.2); COG: Lipid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. (309 aa)
crtZCrtZ; Beta-carotene hydroxylase; Similar to >sp|P21688.1|CRTZ_PANAN RecName: Full=Beta-carotene hydroxylas,CRTZ_PANAN RecName: Full=Beta-carotene hydroxylas(NCBI: P21688.1); COG: Secondary metabolites biosynthesis, transport and catabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane. (175 aa)
aspHAspH; Aspartyl/asparaginyl beta- hydroxylase; Similar to Erwinia pyrifoliae Ep1/96, hypothetical protein EpC_26840 (NCBI: YP_002649673.1); COG: Posttranslational modification, protein turnover, chaperones; Subcellular localization as predicted by Psort 2.0: Unknown. (303 aa)
miaAMiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. (316 aa)
idiIdi; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP). (210 aa)
crtECrtE; Geranylgeranyl pyrophosphate synthetase; Similar to >sp|P21684.1|CRTE_PANAN RecName: Full=Geranylgeranyl pyrophosphate synthetase; Short=GGPP synthetase; AltName: Full=Farnesyltranstransferas,CRTE_PANAN RecName: Full=Geranylgeranyl pyrophosphate synthetase; Short=GGPP synthetase; AltName: Full=Farnesyltranstransferas(NCBI: P21684.1); COG: Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the FPP/GGPP synthase family. (311 aa)
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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