STRINGSTRING
crtI crtI crtY crtY crtE crtE ispF ispF ispH ispH crtB crtB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
crtICrtI; Phytoene dehydrogenase; Similar to >sp|P21685.1|CRTI_PANAN RecName: Full=Phytoene dehydrogenase; AltName: Full=Phytoene desaturas,CRTI_PANAN RecName: Full=Phytoene dehydrogenase; AltName: Full=Phytoene desaturas(NCBI: P21685.1); COG: Secondary metabolites biosynthesis, transport and catabolism; Subcellular localization as predicted by Psort 2.0: Unknown. (492 aa)
crtYCrtY; Lycopene cyclase; Similar to >sp|P21687.1|CRTY_PANAN RecName: Full=Lycopene cyclas,CRTY_PANAN RecName: Full=Lycopene cyclas(NCBI: P21687.1); COG: Secondary metabolites biosynthesis, transport and catabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane. (386 aa)
crtECrtE; Geranylgeranyl pyrophosphate synthetase; Similar to >sp|P21684.1|CRTE_PANAN RecName: Full=Geranylgeranyl pyrophosphate synthetase; Short=GGPP synthetase; AltName: Full=Farnesyltranstransferas,CRTE_PANAN RecName: Full=Geranylgeranyl pyrophosphate synthetase; Short=GGPP synthetase; AltName: Full=Farnesyltranstransferas(NCBI: P21684.1); COG: Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the FPP/GGPP synthase family. (311 aa)
ispFIspF; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). (160 aa)
ispHIspH; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. (316 aa)
crtBCrtB; Phytoene synthase; Similar to >sp|P21683.2|CRTB_PANAN RecName: Full=Phytoene synthas,CRTB_PANAN RecName: Full=Phytoene synthas(NCBI: P21683.2); COG: Lipid transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. (309 aa)
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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