31 items (Schistocephalus solidus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SSLN_LOCUS3552	Uncharacterized protein. (681 aa)
	TR97037	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (155 aa)
	TR88583	FCP1 homology domain-containing protein. (308 aa)
	SSLN_LOCUS299	Uncharacterized protein. (1043 aa)
	SSLN_LOCUS598	Uncharacterized protein. (455 aa)
	SSLN_LOCUS2608	RPOLD domain-containing protein. (293 aa)
	SSLN_LOCUS8044	Uncharacterized protein. (157 aa)
	SSLN_LOCUS8720	Nuclear cap-binding protein subunit 2. (155 aa)
	SSLN_LOCUS9349	Uncharacterized protein. (699 aa)
	SSLN_LOCUS9620	Amidohydro-rel domain-containing protein. (1539 aa)
	A0A183T236	General transcription factor IIF subunit 2. (311 aa)
	A0A183T2Y7	Uncharacterized protein. (73 aa)
	A0A183T3P4	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (786 aa)
	A0A183T7Z5	Uncharacterized protein. (919 aa)
	A0A183TA79	Uncharacterized protein. (67 aa)
	A0A183TAQ9	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (133 aa)
	A0A183TB80	TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (103 aa)
	A0A183TD50	Uncharacterized protein. (108 aa)
	A0A183TF29	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (537 aa)
	A0A183THI5	RNA_pol_L_2 domain-containing protein. (101 aa)
	A0A183THP4	RPOL4c domain-containing protein. (106 aa)
	A0A183THV8	Uncharacterized protein. (270 aa)
	A0A183TI13	MAT1 domain-containing protein. (491 aa)
	A0A183TLV2	Helicase ATP-binding domain-containing protein. (472 aa)
	A0A183TN74	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1883 aa)
	A0A183TNI9	Uncharacterized protein. (383 aa)
	A0A183TU15	Uncharacterized protein. (161 aa)
	SSLN_LOCUS6340	Uncharacterized protein. (276 aa)
	SSLN_LOCUS7683	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1188 aa)
	A0A3P7CXW5	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. (283 aa)
	SSLN_LOCUS9906	HELICc2 domain-containing protein. (332 aa)

Your Current Organism:

Schistocephalus solidus

NCBI taxonomy Id: 70667
Other names: S. solidus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183T236	A0A183T2Y7	A0A183T236	A0A183T2Y7	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.861
A0A183T236	A0A183T3P4	A0A183T236	A0A183T3P4	General transcription factor IIF subunit 2.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.998
A0A183T236	A0A183T7Z5	A0A183T236	A0A183T7Z5	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.990
A0A183T236	A0A183TA79	A0A183T236	A0A183TA79	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.982
A0A183T236	A0A183TAQ9	A0A183T236	A0A183TAQ9	General transcription factor IIF subunit 2.	Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.	0.791
A0A183T236	A0A183TB80	A0A183T236	A0A183TB80	General transcription factor IIF subunit 2.	TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.992
A0A183T236	A0A183TD50	A0A183T236	A0A183TD50	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.983
A0A183T236	A0A183TF29	A0A183T236	A0A183TF29	General transcription factor IIF subunit 2.	General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.	0.989
A0A183T236	A0A183THI5	A0A183T236	A0A183THI5	General transcription factor IIF subunit 2.	RNA_pol_L_2 domain-containing protein.	0.986
A0A183T236	A0A183THP4	A0A183T236	A0A183THP4	General transcription factor IIF subunit 2.	RPOL4c domain-containing protein.	0.990
A0A183T236	A0A183THV8	A0A183T236	A0A183THV8	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.972
A0A183T236	A0A183TI13	A0A183T236	A0A183TI13	General transcription factor IIF subunit 2.	MAT1 domain-containing protein.	0.989
A0A183T236	A0A183TLV2	A0A183T236	A0A183TLV2	General transcription factor IIF subunit 2.	Helicase ATP-binding domain-containing protein.	0.971
A0A183T236	A0A183TN74	A0A183T236	A0A183TN74	General transcription factor IIF subunit 2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996
A0A183T236	A0A183TNI9	A0A183T236	A0A183TNI9	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.996
A0A183T236	A0A183TU15	A0A183T236	A0A183TU15	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.727
A0A183T236	A0A3P7CXW5	A0A183T236	A0A3P7CXW5	General transcription factor IIF subunit 2.	RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.	0.973
A0A183T236	SSLN_LOCUS2608	A0A183T236	A0A183SEG0	General transcription factor IIF subunit 2.	RPOLD domain-containing protein.	0.996
A0A183T236	SSLN_LOCUS299	A0A183T236	A0A183S7V1	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.721
A0A183T236	SSLN_LOCUS3552	A0A183T236	A0A183SH54	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.982