35 items (Schistocephalus solidus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SSLN_LOCUS592	Uncharacterized protein. (897 aa)
	SSLN_LOCUS6507	Nucleoporin_N domain-containing protein. (1549 aa)
	SSLN_LOCUS1042	DUF3453 domain-containing protein. (510 aa)
	SSLN_LOCUS6343	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (1104 aa)
	A0A3P7D099	Uncharacterized protein. (808 aa)
	RAE1L	mRNA export factor. (366 aa)
	NUP54	Nucleoporin p54. (577 aa)
	SSLN_LOCUS472	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (700 aa)
	SSLN_LOCUS839	Uncharacterized protein. (542 aa)
	A0A183TU15	Uncharacterized protein. (161 aa)
	A0A183TQA9	Uncharacterized protein. (252 aa)
	A0A183TQA7	Uncharacterized protein. (338 aa)
	A0A183TNA3	NUP50 domain-containing protein. (294 aa)
	A0A183TMN0	RanBD1 domain-containing protein. (264 aa)
	A0A183TKB4	Uncharacterized protein. (700 aa)
	SSLN_LOCUS3845	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (516 aa)
	SSLN_LOCUS4886	WD_REPEATS_REGION domain-containing protein. (597 aa)
	SSLN_LOCUS6078	Uncharacterized protein. (1151 aa)
	SSLN_LOCUS6557	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (212 aa)
	SSLN_LOCUS7253	Uncharacterized protein. (1354 aa)
	SSLN_LOCUS7255	Uncharacterized protein. (1043 aa)
	SSLN_LOCUS7479	Uncharacterized protein. (1523 aa)
	SSLN_LOCUS7946	CPSF_A domain-containing protein. (550 aa)
	SSLN_LOCUS8720	Nuclear cap-binding protein subunit 2. (155 aa)
	SSLN_LOCUS8963	Uncharacterized protein. (2553 aa)
	SSLN_LOCUS9851	Peptidase S59 domain-containing protein. (2155 aa)
	A0A183T227	Uncharacterized protein. (1221 aa)
	A0A183T5X6	RRM domain-containing protein. (125 aa)
	A0A183T8Q7	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (368 aa)
	A0A183TAZ3	Uncharacterized protein. (821 aa)
	A0A183TBU6	Fip1 domain-containing protein. (397 aa)
	A0A183THN5	Uncharacterized protein. (885 aa)
	SSLN_LOCUS9509	Symplekin_C domain-containing protein. (695 aa)
	A0A3P7F2K4	Uncharacterized protein. (338 aa)
	SSLN_LOCUS8772	Uncharacterized protein. (1507 aa)

Your Current Organism:

Schistocephalus solidus

NCBI taxonomy Id: 70667
Other names: S. solidus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183T227	A0A183T5X6	A0A183T227	A0A183T5X6	Uncharacterized protein.	RRM domain-containing protein.	0.887
A0A183T227	A0A183T8Q7	A0A183T227	A0A183T8Q7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.932
A0A183T227	A0A183TAZ3	A0A183T227	A0A183TAZ3	Uncharacterized protein.	Uncharacterized protein.	0.864
A0A183T227	A0A183TBU6	A0A183T227	A0A183TBU6	Uncharacterized protein.	Fip1 domain-containing protein.	0.712
A0A183T227	A0A183THN5	A0A183T227	A0A183THN5	Uncharacterized protein.	Uncharacterized protein.	0.764
A0A183T227	A0A183TKB4	A0A183T227	A0A183TKB4	Uncharacterized protein.	Uncharacterized protein.	0.975
A0A183T227	A0A183TMN0	A0A183T227	A0A183TMN0	Uncharacterized protein.	RanBD1 domain-containing protein.	0.807
A0A183T227	A0A183TNA3	A0A183T227	A0A183TNA3	Uncharacterized protein.	NUP50 domain-containing protein.	0.807
A0A183T227	A0A183TU15	A0A183T227	A0A183TU15	Uncharacterized protein.	Uncharacterized protein.	0.758
A0A183T227	A0A3P7D099	A0A183T227	A0A3P7D099	Uncharacterized protein.	Uncharacterized protein.	0.764
A0A183T227	NUP54	A0A183T227	A0A0X3P4E7	Uncharacterized protein.	Nucleoporin p54.	0.890
A0A183T227	RAE1L	A0A183T227	A0A0X3NUJ4	Uncharacterized protein.	mRNA export factor.	0.943
A0A183T227	SSLN_LOCUS3845	A0A183T227	A0A183SHZ7	Uncharacterized protein.	Uncharacterized protein; Belongs to the WD repeat SEC13 family.	0.902
A0A183T227	SSLN_LOCUS472	A0A183T227	A0A183S8C4	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.946
A0A183T227	SSLN_LOCUS4886	A0A183T227	A0A183SKY8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.703
A0A183T227	SSLN_LOCUS592	A0A183T227	A0A3P7C1U9	Uncharacterized protein.	Uncharacterized protein.	0.624
A0A183T227	SSLN_LOCUS6078	A0A183T227	A0A183SPD0	Uncharacterized protein.	Uncharacterized protein.	0.948
A0A183T227	SSLN_LOCUS6343	A0A183T227	A0A3P7CJ61	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.984
A0A183T227	SSLN_LOCUS6507	A0A183T227	A0A3P7C3N4	Uncharacterized protein.	Nucleoporin_N domain-containing protein.	0.935
A0A183T227	SSLN_LOCUS6557	A0A183T227	A0A183SQQ9	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.	0.681