38 items (Schistocephalus solidus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SSLN_LOCUS8720	Nuclear cap-binding protein subunit 2. (155 aa)
	SSLN_LOCUS9369	SH3 domain-containing protein. (141 aa)
	A0A183T1E0	Uncharacterized protein. (590 aa)
	A0A183T236	General transcription factor IIF subunit 2. (311 aa)
	A0A183T3P4	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (786 aa)
	A0A183T3P6	Uncharacterized protein. (698 aa)
	A0A183T7C6	Protein kinase domain-containing protein. (241 aa)
	A0A183TA79	Uncharacterized protein. (67 aa)
	A0A183TB80	TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (103 aa)
	A0A183TD50	Uncharacterized protein. (108 aa)
	A0A183TDC2	Uncharacterized protein. (330 aa)
	A0A183TDK0	Uncharacterized protein. (397 aa)
	A0A183THI5	RNA_pol_L_2 domain-containing protein. (101 aa)
	A0A183THP4	RPOL4c domain-containing protein. (106 aa)
	A0A183TMB4	Uncharacterized protein. (350 aa)
	A0A183TN74	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1883 aa)
	A0A183TNI9	Uncharacterized protein. (383 aa)
	A0A183TU15	Uncharacterized protein. (161 aa)
	SSLN_LOCUS6939	Uncharacterized protein. (162 aa)
	SSLN_LOCUS6522	Uncharacterized protein. (171 aa)
	A0A3P7D8C9	Uncharacterized protein. (350 aa)
	A0A3P7D7E4	Fibronectin type-III domain-containing protein. (116 aa)
	A0A3P7D004	Uncharacterized protein. (327 aa)
	SSLN_LOCUS7683	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1188 aa)
	PP2AB	Serine/threonine-protein phosphatase. (311 aa)
	RS27A	Ubiquitin-40S ribosomal protein S27a. (153 aa)
	RL40	Ubiquitin-60S ribosomal protein L40. (128 aa)
	TR97037	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (155 aa)
	SSLN_LOCUS410	Uncharacterized protein. (638 aa)
	SSLN_LOCUS523	Uncharacterized protein. (287 aa)
	SSLN_LOCUS1333	Uncharacterized protein. (494 aa)
	SSLN_LOCUS2608	RPOLD domain-containing protein. (293 aa)
	SSLN_LOCUS3570	Uncharacterized protein. (190 aa)
	SSLN_LOCUS5186	WAP domain-containing protein. (269 aa)
	SSLN_LOCUS6525	Uncharacterized protein. (813 aa)
	SSLN_LOCUS7569	Ig-like domain-containing protein. (710 aa)
	SSLN_LOCUS8044	Uncharacterized protein. (157 aa)
	SSLN_LOCUS8658	Ig-like domain-containing protein. (327 aa)

Your Current Organism:

Schistocephalus solidus

NCBI taxonomy Id: 70667
Other names: S. solidus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183T1E0	RL40	A0A183T1E0	A0A0X3P4Y8	Uncharacterized protein.	Ubiquitin-60S ribosomal protein L40.	0.507
A0A183T1E0	RS27A	A0A183T1E0	A0A0X3NQR8	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.470
A0A183T1E0	SSLN_LOCUS3570	A0A183T1E0	A0A183SH72	Uncharacterized protein.	Uncharacterized protein.	0.404
A0A183T236	A0A183T3P4	A0A183T236	A0A183T3P4	General transcription factor IIF subunit 2.	Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.	0.998
A0A183T236	A0A183TA79	A0A183T236	A0A183TA79	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.982
A0A183T236	A0A183TB80	A0A183T236	A0A183TB80	General transcription factor IIF subunit 2.	TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.992
A0A183T236	A0A183TD50	A0A183T236	A0A183TD50	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.983
A0A183T236	A0A183THI5	A0A183T236	A0A183THI5	General transcription factor IIF subunit 2.	RNA_pol_L_2 domain-containing protein.	0.986
A0A183T236	A0A183THP4	A0A183T236	A0A183THP4	General transcription factor IIF subunit 2.	RPOL4c domain-containing protein.	0.990
A0A183T236	A0A183TN74	A0A183T236	A0A183TN74	General transcription factor IIF subunit 2.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996
A0A183T236	A0A183TNI9	A0A183T236	A0A183TNI9	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.996
A0A183T236	A0A183TU15	A0A183T236	A0A183TU15	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.727
A0A183T236	SSLN_LOCUS1333	A0A183T236	A0A183SAT5	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.604
A0A183T236	SSLN_LOCUS2608	A0A183T236	A0A183SEG0	General transcription factor IIF subunit 2.	RPOLD domain-containing protein.	0.996
A0A183T236	SSLN_LOCUS410	A0A183T236	A0A183S862	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.686
A0A183T236	SSLN_LOCUS523	A0A183T236	A0A183S8H5	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.604
A0A183T236	SSLN_LOCUS7683	A0A183T236	A0A3P7CNE0	General transcription factor IIF subunit 2.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996
A0A183T236	SSLN_LOCUS8044	A0A183T236	A0A183SUZ6	General transcription factor IIF subunit 2.	Uncharacterized protein.	0.993
A0A183T236	SSLN_LOCUS8720	A0A183T236	A0A183SWX2	General transcription factor IIF subunit 2.	Nuclear cap-binding protein subunit 2.	0.745
A0A183T236	TR97037	A0A183T236	A0A0X3PBI0	General transcription factor IIF subunit 2.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.987