30 items (Schistocephalus solidus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A183TNP7	WD_REPEATS_REGION domain-containing protein. (224 aa)
	A0A183TQA7	Uncharacterized protein. (338 aa)
	SSLN_LOCUS624	RRM domain-containing protein. (230 aa)
	SSLN_LOCUS956	Small nuclear ribonucleoprotein Sm D3. (120 aa)
	A0A183TQA9	Uncharacterized protein. (252 aa)
	A0A183TU15	Uncharacterized protein. (161 aa)
	SSLN_LOCUS2310	WD_REPEATS_REGION domain-containing protein. (344 aa)
	SSLN_LOCUS4886	WD_REPEATS_REGION domain-containing protein. (597 aa)
	SSLN_LOCUS6953	Uncharacterized protein. (403 aa)
	SSLN_LOCUS7087	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (226 aa)
	SSLN_LOCUS7847	RRM domain-containing protein. (361 aa)
	SSLN_LOCUS7394	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (500 aa)
	SSLN_LOCUS7946	CPSF_A domain-containing protein. (550 aa)
	SSLN_LOCUS8227	Uncharacterized protein. (287 aa)
	SSLN_LOCUS8720	Nuclear cap-binding protein subunit 2. (155 aa)
	SSLN_LOCUS9773	Suf domain-containing protein. (818 aa)
	A0A183T230	Uncharacterized protein. (387 aa)
	A0A183T5U5	Cleavage stimulation factor subunit 2. (432 aa)
	A0A183T8U6	Sm domain-containing protein. (204 aa)
	SSLN_LOCUS839	Uncharacterized protein. (542 aa)
	SSLN_LOCUS592	Uncharacterized protein. (897 aa)
	SSLN_LOCUS1042	DUF3453 domain-containing protein. (510 aa)
	A0A3P7CKJ9	Sm domain-containing protein. (86 aa)
	SSLN_LOCUS9509	Symplekin_C domain-containing protein. (695 aa)
	A0A3P7EJ46	Sm domain-containing protein. (77 aa)
	A0A3P7F2K4	Uncharacterized protein. (338 aa)
	A0A183T8X8	Uncharacterized protein. (727 aa)
	A0A183TBU6	Fip1 domain-containing protein. (397 aa)
	A0A183TMJ3	SLBP_RNA_bind domain-containing protein. (141 aa)
	A0A183TNA0	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (86 aa)

Your Current Organism:

Schistocephalus solidus

NCBI taxonomy Id: 70667
Other names: S. solidus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A183T230	A0A183T5U5	A0A183T230	A0A183T5U5	Uncharacterized protein.	Cleavage stimulation factor subunit 2.	0.971
A0A183T230	A0A183T8X8	A0A183T230	A0A183T8X8	Uncharacterized protein.	Uncharacterized protein.	0.913
A0A183T230	A0A183TBU6	A0A183T230	A0A183TBU6	Uncharacterized protein.	Fip1 domain-containing protein.	0.986
A0A183T230	A0A183TNP7	A0A183T230	A0A183TNP7	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.725
A0A183T230	A0A183TQA7	A0A183T230	A0A183TQA7	Uncharacterized protein.	Uncharacterized protein.	0.864
A0A183T230	A0A183TQA9	A0A183T230	A0A183TQA9	Uncharacterized protein.	Uncharacterized protein.	0.864
A0A183T230	A0A183TU15	A0A183T230	A0A183TU15	Uncharacterized protein.	Uncharacterized protein.	0.801
A0A183T230	A0A3P7F2K4	A0A183T230	A0A3P7F2K4	Uncharacterized protein.	Uncharacterized protein.	0.964
A0A183T230	SSLN_LOCUS1042	A0A183T230	A0A3P7C4B9	Uncharacterized protein.	DUF3453 domain-containing protein.	0.864
A0A183T230	SSLN_LOCUS2310	A0A183T230	A0A183SDL2	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.725
A0A183T230	SSLN_LOCUS4886	A0A183T230	A0A183SKY8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.985
A0A183T230	SSLN_LOCUS592	A0A183T230	A0A3P7C1U9	Uncharacterized protein.	Uncharacterized protein.	0.963
A0A183T230	SSLN_LOCUS624	A0A183T230	A0A183S8S6	Uncharacterized protein.	RRM domain-containing protein.	0.878
A0A183T230	SSLN_LOCUS6953	A0A183T230	A0A183SRV5	Uncharacterized protein.	Uncharacterized protein.	0.826
A0A183T230	SSLN_LOCUS7087	A0A183T230	A0A183SS89	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.831
A0A183T230	SSLN_LOCUS7847	A0A183T230	A0A183SUE9	Uncharacterized protein.	RRM domain-containing protein.	0.750
A0A183T230	SSLN_LOCUS7946	A0A183T230	A0A183SUP8	Uncharacterized protein.	CPSF_A domain-containing protein.	0.963
A0A183T230	SSLN_LOCUS8227	A0A183T230	A0A183SVH9	Uncharacterized protein.	Uncharacterized protein.	0.932
A0A183T230	SSLN_LOCUS839	A0A183T230	A0A3P7BLQ4	Uncharacterized protein.	Uncharacterized protein.	0.985
A0A183T230	SSLN_LOCUS8720	A0A183T230	A0A183SWX2	Uncharacterized protein.	Nuclear cap-binding protein subunit 2.	0.763