(5 nodes) Negative regulation of mRNA splicing, via spliceosome network (Tribolium castaneum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D6X2L1_TRICA	RNA-binding protein 1-like Protein. (202 aa)
	D2A2M1_TRICA	Uncharacterized protein. (222 aa)
	D6WH33_TRICA	U1 small nuclear ribonucleoprotein 70 kDa-like Protein. (408 aa)
	D6X550_TRICA	RNA-binding protein 1-like Protein. (129 aa)
	D6WRB8_TRICA	Far upstream element-binding protein 1-like Protein. (748 aa)

Your Current Organism:

Tribolium castaneum

NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D2A2M1_TRICA	D6WH33_TRICA	D2A2M1	D6WH33	Uncharacterized protein.	U1 small nuclear ribonucleoprotein 70 kDa-like Protein.	0.609
D6WH33_TRICA	D2A2M1_TRICA	D6WH33	D2A2M1	U1 small nuclear ribonucleoprotein 70 kDa-like Protein.	Uncharacterized protein.	0.609
D6WH33_TRICA	D6X2L1_TRICA	D6WH33	D6X2L1	U1 small nuclear ribonucleoprotein 70 kDa-like Protein.	RNA-binding protein 1-like Protein.	0.609
D6WH33_TRICA	D6X550_TRICA	D6WH33	D6X550	U1 small nuclear ribonucleoprotein 70 kDa-like Protein.	RNA-binding protein 1-like Protein.	0.609
D6X2L1_TRICA	D6WH33_TRICA	D6X2L1	D6WH33	RNA-binding protein 1-like Protein.	U1 small nuclear ribonucleoprotein 70 kDa-like Protein.	0.609
D6X550_TRICA	D6WH33_TRICA	D6X550	D6WH33	RNA-binding protein 1-like Protein.	U1 small nuclear ribonucleoprotein 70 kDa-like Protein.	0.609