(19 nodes) Zinc finger, CCCH-type superfamily network (Tribolium castaneum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A139W8L9	Protein suppressor of sable-like Protein. (174 aa)
	A0A139WDI5	Roquin-1-like Protein. (880 aa)
	A0A139WDR9	Uncharacterized protein. (944 aa)
	A0A139WGF3	C3H1-type domain-containing protein. (802 aa)
	A0A139WIW9	Uncharacterized protein. (411 aa)
	A0A139WJ07	Zinc finger CCCH domain-containing protein 11A-like Protein. (371 aa)
	A0A139WKW0	Zinc finger matrin-type protein 5-like Protein. (160 aa)
	A0A139WP96	Putative E3 ubiquitin-protein ligase makorin-1-like Protein. (471 aa)
	D1ZZA3_TRICA	Dosage compensation regulator-like Protein. (1241 aa)
	D6WBZ0_TRICA	Cleavage and polyadenylation specificity factor subunit 4-like Protein. (258 aa)
	D6WE79_TRICA	Zinc finger CCCH domain-containing protein 15 homolog-like Protein. (388 aa)
	Cpsf4	Cleavage and polyadenylation specificity factor subunit 4-like Protein. (280 aa)
	D6WGD3_TRICA	C3H1-type domain-containing protein. (800 aa)
	D6WI32_TRICA	Uncharacterized protein. (472 aa)
	D6WQ47_TRICA	RING finger protein 113A-like Protein. (327 aa)
	D6WVA8_TRICA	Nucleoporin-like protein 2. (356 aa)
	D6WWM5_TRICA	Pre-mRNA-splicing factor RBM22-like Protein. (420 aa)
	D6WZ20_TRICA	RING finger protein unkempt-like Protein. (727 aa)
	D6X270_TRICA	C3H1-type domain-containing protein. (184 aa)

Your Current Organism:

Tribolium castaneum

NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A139WGF3	D6WI32_TRICA	A0A139WGF3	D6WI32	C3H1-type domain-containing protein.	Uncharacterized protein.	0.522
A0A139WJ07	D6WE79_TRICA	A0A139WJ07	D6WE79	Zinc finger CCCH domain-containing protein 11A-like Protein.	Zinc finger CCCH domain-containing protein 15 homolog-like Protein.	0.402
D1ZZA3_TRICA	D6WQ47_TRICA	D1ZZA3	D6WQ47	Dosage compensation regulator-like Protein.	RING finger protein 113A-like Protein.	0.480
D6WE79_TRICA	A0A139WJ07	D6WE79	A0A139WJ07	Zinc finger CCCH domain-containing protein 15 homolog-like Protein.	Zinc finger CCCH domain-containing protein 11A-like Protein.	0.402
D6WI32_TRICA	A0A139WGF3	D6WI32	A0A139WGF3	Uncharacterized protein.	C3H1-type domain-containing protein.	0.522
D6WQ47_TRICA	D1ZZA3_TRICA	D6WQ47	D1ZZA3	RING finger protein 113A-like Protein.	Dosage compensation regulator-like Protein.	0.480
D6WQ47_TRICA	D6WWM5_TRICA	D6WQ47	D6WWM5	RING finger protein 113A-like Protein.	Pre-mRNA-splicing factor RBM22-like Protein.	0.883
D6WWM5_TRICA	D6WQ47_TRICA	D6WWM5	D6WQ47	Pre-mRNA-splicing factor RBM22-like Protein.	RING finger protein 113A-like Protein.	0.883