STRINGSTRING
nth nth ADY31156.1 ADY31156.1 ADY31385.1 ADY31385.1 ung ung ADY32790.1 ADY32790.1 ung-2 ung-2 ADY34316.1 ADY34316.1 ADY32150.1 ADY32150.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (212 aa)
ADY31156.1KEGG: pdi:BDI_3915 hypothetical protein; SPTR: Putative uncharacterized protein. (253 aa)
ADY31385.1InterPro IPR014127; KEGG: fbc:FB2170_10686 hypothetical protein; PFAM: Conserved hypothetical protein CHP02757; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02757; PFAM: Protein of unknown function (DUF2400); TIGRFAM: conserved hypothetical protein TIGR02757. (254 aa)
ungUracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (220 aa)
ADY32790.1Hypothetical protein; COGs: COG3663 G:T/U mismatch-specific DNA glycosylase; KEGG: bfs:BF3386 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uracil DNA glycosylase superfamily. (206 aa)
ung-2Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (221 aa)
ADY34316.1COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR005019: IPR004597; KEGG: bvu:BVU_0852 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase; PRIAM: DNA-3-methyladenine glycosylase I; SPTR: DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I. (195 aa)
ADY32150.1KEGG: pdi:BDI_1246 hypothetical protein; SPTR: Putative uncharacterized protein. (355 aa)
Your Current Organism:
Odoribacter splanchnicus
NCBI taxonomy Id: 709991
Other names: O. splanchnicus DSM 20712, Odoribacter splanchnicus DSM 20712, Odoribacter splanchnicus str. DSM 20712, Odoribacter splanchnicus strain DSM 20712
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