(33 nodes) Ribosome assembly network (Heliothis virescens)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	B5V51_13171	G domain-containing protein. (354 aa)
	B5V51_3835	Uncharacterized protein. (229 aa)
	B5V51_2949	Uncharacterized protein. (920 aa)
	B5V51_4287	Ribosomal_L6e_N domain-containing protein. (272 aa)
	B5V51_8618	Uncharacterized protein. (493 aa)
	B5V51_2840	Tr-type G domain-containing protein. (943 aa)
	B5V51_667	VWFA domain-containing protein. (239 aa)
	B5V51_14419	Ribosome biogenesis protein NOP53; May play a role in ribosome biogenesis. Belongs to the NOP53 family. (462 aa)
	B5V51_13525	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (243 aa)
	B5V51_3736	Brix domain-containing protein. (315 aa)
	B5V51_13970	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family. (297 aa)
	B5V51_20	Uncharacterized protein. (251 aa)
	B5V51_6843	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (219 aa)
	B5V51_8693	RRM domain-containing protein. (193 aa)
	B5V51_9409	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (305 aa)
	EIF6	Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
	B5V51_14180	Uncharacterized protein. (278 aa)
	B5V51_110	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family. (215 aa)
	B5V51_608	Uncharacterized protein. (189 aa)
	B5V51_622	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family. (228 aa)
	B5V51_1331	EFG_C domain-containing protein. (177 aa)
	B5V51_1536	PI3K/PI4K domain-containing protein; Belongs to the PI3/PI4-kinase family. (1882 aa)
	B5V51_3394	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5413 aa)
	B5V51_5626	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (315 aa)
	B5V51_5081	40S ribosomal protein S27. (84 aa)
	B5V51_6122	Brix domain-containing protein. (270 aa)
	B5V51_6917	Brix domain-containing protein. (528 aa)
	B5V51_7255	60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
	B5V51_8419	Ribosomal_L16 domain-containing protein. (219 aa)
	B5V51_8578	WD_REPEATS_REGION domain-containing protein. (469 aa)
	B5V51_9076	Ku domain-containing protein. (704 aa)
	B5V51_9898	FtsJ domain-containing protein. (197 aa)
	B5V51_9957	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family. (147 aa)

Your Current Organism:

Heliothis virescens

NCBI taxonomy Id: 7102
Other names: Chloridea virescens, H. virescens, Helicoverpa virescens, tobacco budworm

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
B5V51_110	B5V51_3835	A0A2A4JMU7	A0A2A4K452	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.	Uncharacterized protein.	0.435
B5V51_110	B5V51_8618	A0A2A4JMU7	A0A2A4K814	Uncharacterized protein; Belongs to the peroxisomal membrane protein PXMP2/4 family.	Uncharacterized protein.	0.462
B5V51_13171	B5V51_13525	A0A2A4ITF8	A0A2A4K7G6	G domain-containing protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.459
B5V51_13171	B5V51_3835	A0A2A4ITF8	A0A2A4K452	G domain-containing protein.	Uncharacterized protein.	0.464
B5V51_13171	B5V51_5626	A0A2A4ITF8	A0A2A4J9D4	G domain-containing protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.459
B5V51_13171	B5V51_608	A0A2A4ITF8	A0A2A4JMJ5	G domain-containing protein.	Uncharacterized protein.	0.903
B5V51_13171	B5V51_622	A0A2A4ITF8	A0A2A4JLG8	G domain-containing protein.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.991
B5V51_13171	B5V51_6843	A0A2A4ITF8	A0A2A4K1R5	G domain-containing protein.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.962
B5V51_13171	B5V51_8618	A0A2A4ITF8	A0A2A4K814	G domain-containing protein.	Uncharacterized protein.	0.404
B5V51_13171	B5V51_9409	A0A2A4ITF8	A0A2A4JYM1	G domain-containing protein.	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.	0.885
B5V51_1331	B5V51_13525	A0A2A4JJN6	A0A2A4K7G6	EFG_C domain-containing protein.	Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.	0.958
B5V51_1331	B5V51_13970	A0A2A4JJN6	A0A2A4ISJ8	EFG_C domain-containing protein.	Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.	0.989
B5V51_1331	B5V51_20	A0A2A4JJN6	A0A2A4KB27	EFG_C domain-containing protein.	Uncharacterized protein.	0.968
B5V51_1331	B5V51_2840	A0A2A4JJN6	A0A2A4K485	EFG_C domain-containing protein.	Tr-type G domain-containing protein.	0.921
B5V51_1331	B5V51_4287	A0A2A4JJN6	A0A2A4K2E7	EFG_C domain-containing protein.	Ribosomal_L6e_N domain-containing protein.	0.811
B5V51_1331	B5V51_5081	A0A2A4JJN6	A0A2A4J917	EFG_C domain-containing protein.	40S ribosomal protein S27.	0.902
B5V51_1331	B5V51_5626	A0A2A4JJN6	A0A2A4J9D4	EFG_C domain-containing protein.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.954
B5V51_1331	B5V51_608	A0A2A4JJN6	A0A2A4JMJ5	EFG_C domain-containing protein.	Uncharacterized protein.	0.923
B5V51_1331	B5V51_622	A0A2A4JJN6	A0A2A4JLG8	EFG_C domain-containing protein.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.953
B5V51_1331	B5V51_6843	A0A2A4JJN6	A0A2A4K1R5	EFG_C domain-containing protein.	Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.	0.953