STRINGSTRING
AFM15236.1 AFM15236.1 AFM15701.1 AFM15701.1 AFM15702.1 AFM15702.1 AFM15703.1 AFM15703.1 AFM15704.1 AFM15704.1 AFM15705.1 AFM15705.1 AFM15706.1 AFM15706.1 AFM15710.1 AFM15710.1 AFM16941.1 AFM16941.1 AFM18591.1 AFM18591.1 AFM18997.1 AFM18997.1 AFM18999.1 AFM18999.1 AFM19000.1 AFM19000.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AFM15236.1Galactose mutarotase-like enzyme; PFAM: Aldose 1-epimerase. (300 aa)
AFM15701.1PFAM: Protein of unknown function (DUF664). (200 aa)
AFM15702.1Hypothetical protein. (176 aa)
AFM15703.1Putative transcriptional regulator; PFAM: HTH domain. (316 aa)
AFM15704.1Alpha-mannosidase; PFAM: Glycosyl hydrolases family 38 C-terminal domain; NPCBM-associated, NEW3 domain of alpha-galactosidase; Glycosyl hydrolases family 38 N-terminal domain; Alpha mannosidase, middle domain. (1380 aa)
AFM15705.1Hypothetical protein. (191 aa)
AFM15706.1Transcriptional regulator/sugar kinase; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase). (302 aa)
AFM15710.1Esterase/lipase. (553 aa)
AFM16941.1Transcriptional regulator/sugar kinase; PFAM: ROK family. (270 aa)
AFM18591.1Transcriptional regulator/sugar kinase; PFAM: ROK family. (418 aa)
AFM18997.1Transcriptional regulator/sugar kinase; PFAM: ROK family. (396 aa)
AFM18999.1Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily. (404 aa)
AFM19000.1Hypothetical protein. (90 aa)
Your Current Organism:
Mycolicibacterium chubuense
NCBI taxonomy Id: 710421
Other names: M. chubuense NBB4, Mycobacterium chubuense NBB4, Mycolicibacterium chubuense NBB4
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