Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A6P39_11350 | OAA95429.1 | A6P39_11350 | A6P39_38855 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.554 |
| A6P39_11350 | OAA95456.1 | A6P39_11350 | A6P39_38995 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.706 |
| A6P39_11350 | OAA96492.1 | A6P39_11350 | A6P39_33975 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.554 |
| A6P39_11350 | OAA98061.1 | A6P39_11350 | A6P39_25210 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA helicase RecD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.596 |
| A6P39_11350 | OAA99382.1 | A6P39_11350 | A6P39_18285 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.788 |
| A6P39_11350 | OAA99643.1 | A6P39_11350 | A6P39_16765 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 5'-3' exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.672 |
| A6P39_11350 | OAA99884.1 | A6P39_11350 | A6P39_15725 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.554 |
| A6P39_11350 | OAB00005.1 | A6P39_11350 | A6P39_14405 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.451 |
| A6P39_11350 | OAB00006.1 | A6P39_11350 | A6P39_14410 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.451 |
| A6P39_11350 | OAB00913.1 | A6P39_11350 | A6P39_10600 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Export associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.441 |
| A6P39_11350 | OAB01796.1 | A6P39_11350 | A6P39_05190 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.451 |
| A6P39_11350 | OAB01908.1 | A6P39_11350 | A6P39_04050 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.554 |
| A6P39_11350 | OAB01917.1 | A6P39_11350 | A6P39_04100 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.613 |
| A6P39_11350 | polA | A6P39_11350 | A6P39_10375 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.787 |
| A6P39_11350 | recA | A6P39_11350 | A6P39_31425 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | DNA recombination/repair protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.895 |
| A6P39_11350 | recD2 | A6P39_11350 | A6P39_28880 | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Helicase; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily. | 0.451 |
| OAA95270.1 | OAA98325.1 | A6P39_39985 | A6P39_23745 | Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.643 |
| OAA95429.1 | A6P39_11350 | A6P39_38855 | A6P39_11350 | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Type VII secretion protein EccC; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.554 |
| OAA95429.1 | OAA95456.1 | A6P39_38855 | A6P39_38995 | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.522 |
| OAA95429.1 | OAA96492.1 | A6P39_38855 | A6P39_33975 | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.717 |
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