5 items (Eucalyptus grandis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EUGRSUZ_I01500	Uncharacterized protein. (284 aa)
	EUGRSUZ_H00827	Uncharacterized protein. (971 aa)
	EUGRSUZ_F02084	Uncharacterized protein. (927 aa)
	EUGRSUZ_E00596	Uncharacterized protein. (701 aa)
	EUGRSUZ_B03816	BHLH domain-containing protein. (940 aa)

Your Current Organism:

Eucalyptus grandis

NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EUGRSUZ_B03816	EUGRSUZ_E00596	A0A059DAT6	A0A059C2J7	BHLH domain-containing protein.	Uncharacterized protein.	0.524
EUGRSUZ_B03816	EUGRSUZ_F02084	A0A059DAT6	A0A059BS36	BHLH domain-containing protein.	Uncharacterized protein.	0.403
EUGRSUZ_B03816	EUGRSUZ_H00827	A0A059DAT6	A0A059AWH1	BHLH domain-containing protein.	Uncharacterized protein.	0.488
EUGRSUZ_B03816	EUGRSUZ_I01500	A0A059DAT6	A0A059APM2	BHLH domain-containing protein.	Uncharacterized protein.	0.431
EUGRSUZ_E00596	EUGRSUZ_B03816	A0A059C2J7	A0A059DAT6	Uncharacterized protein.	BHLH domain-containing protein.	0.524
EUGRSUZ_E00596	EUGRSUZ_F02084	A0A059C2J7	A0A059BS36	Uncharacterized protein.	Uncharacterized protein.	0.415
EUGRSUZ_E00596	EUGRSUZ_H00827	A0A059C2J7	A0A059AWH1	Uncharacterized protein.	Uncharacterized protein.	0.521
EUGRSUZ_E00596	EUGRSUZ_I01500	A0A059C2J7	A0A059APM2	Uncharacterized protein.	Uncharacterized protein.	0.508
EUGRSUZ_F02084	EUGRSUZ_B03816	A0A059BS36	A0A059DAT6	Uncharacterized protein.	BHLH domain-containing protein.	0.403
EUGRSUZ_F02084	EUGRSUZ_E00596	A0A059BS36	A0A059C2J7	Uncharacterized protein.	Uncharacterized protein.	0.415
EUGRSUZ_F02084	EUGRSUZ_H00827	A0A059BS36	A0A059AWH1	Uncharacterized protein.	Uncharacterized protein.	0.516
EUGRSUZ_F02084	EUGRSUZ_I01500	A0A059BS36	A0A059APM2	Uncharacterized protein.	Uncharacterized protein.	0.493
EUGRSUZ_H00827	EUGRSUZ_B03816	A0A059AWH1	A0A059DAT6	Uncharacterized protein.	BHLH domain-containing protein.	0.488
EUGRSUZ_H00827	EUGRSUZ_E00596	A0A059AWH1	A0A059C2J7	Uncharacterized protein.	Uncharacterized protein.	0.521
EUGRSUZ_H00827	EUGRSUZ_F02084	A0A059AWH1	A0A059BS36	Uncharacterized protein.	Uncharacterized protein.	0.516
EUGRSUZ_H00827	EUGRSUZ_I01500	A0A059AWH1	A0A059APM2	Uncharacterized protein.	Uncharacterized protein.	0.511
EUGRSUZ_I01500	EUGRSUZ_B03816	A0A059APM2	A0A059DAT6	Uncharacterized protein.	BHLH domain-containing protein.	0.431
EUGRSUZ_I01500	EUGRSUZ_E00596	A0A059APM2	A0A059C2J7	Uncharacterized protein.	Uncharacterized protein.	0.508
EUGRSUZ_I01500	EUGRSUZ_F02084	A0A059APM2	A0A059BS36	Uncharacterized protein.	Uncharacterized protein.	0.493
EUGRSUZ_I01500	EUGRSUZ_H00827	A0A059APM2	A0A059AWH1	Uncharacterized protein.	Uncharacterized protein.	0.511