(5 nodes) THO complex part of transcription export complex network (Eucalyptus grandis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EUGRSUZ_F01999	WD_REPEATS_REGION domain-containing protein. (375 aa)
	EUGRSUZ_F02336	Uncharacterized protein. (874 aa)
	EUGRSUZ_E03954	Uncharacterized protein. (608 aa)
	EUGRSUZ_D02531	Uncharacterized protein. (241 aa)
	EUGRSUZ_B02697	Uncharacterized protein. (1851 aa)

Your Current Organism:

Eucalyptus grandis

NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EUGRSUZ_B02697	EUGRSUZ_D02531	A0A059D5Z7	A0A059CJK5	Uncharacterized protein.	Uncharacterized protein.	0.996
EUGRSUZ_B02697	EUGRSUZ_E03954	A0A059D5Z7	A0A059CAC3	Uncharacterized protein.	Uncharacterized protein.	0.998
EUGRSUZ_B02697	EUGRSUZ_F01999	A0A059D5Z7	A0A059BRQ3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.999
EUGRSUZ_B02697	EUGRSUZ_F02336	A0A059D5Z7	A0A059BRZ1	Uncharacterized protein.	Uncharacterized protein.	0.996
EUGRSUZ_D02531	EUGRSUZ_B02697	A0A059CJK5	A0A059D5Z7	Uncharacterized protein.	Uncharacterized protein.	0.996
EUGRSUZ_D02531	EUGRSUZ_E03954	A0A059CJK5	A0A059CAC3	Uncharacterized protein.	Uncharacterized protein.	0.997
EUGRSUZ_D02531	EUGRSUZ_F01999	A0A059CJK5	A0A059BRQ3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998
EUGRSUZ_D02531	EUGRSUZ_F02336	A0A059CJK5	A0A059BRZ1	Uncharacterized protein.	Uncharacterized protein.	0.998
EUGRSUZ_E03954	EUGRSUZ_B02697	A0A059CAC3	A0A059D5Z7	Uncharacterized protein.	Uncharacterized protein.	0.998
EUGRSUZ_E03954	EUGRSUZ_D02531	A0A059CAC3	A0A059CJK5	Uncharacterized protein.	Uncharacterized protein.	0.997
EUGRSUZ_E03954	EUGRSUZ_F01999	A0A059CAC3	A0A059BRQ3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.997
EUGRSUZ_E03954	EUGRSUZ_F02336	A0A059CAC3	A0A059BRZ1	Uncharacterized protein.	Uncharacterized protein.	0.998
EUGRSUZ_F01999	EUGRSUZ_B02697	A0A059BRQ3	A0A059D5Z7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.999
EUGRSUZ_F01999	EUGRSUZ_D02531	A0A059BRQ3	A0A059CJK5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.998
EUGRSUZ_F01999	EUGRSUZ_E03954	A0A059BRQ3	A0A059CAC3	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.997
EUGRSUZ_F01999	EUGRSUZ_F02336	A0A059BRQ3	A0A059BRZ1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.998
EUGRSUZ_F02336	EUGRSUZ_B02697	A0A059BRZ1	A0A059D5Z7	Uncharacterized protein.	Uncharacterized protein.	0.996
EUGRSUZ_F02336	EUGRSUZ_D02531	A0A059BRZ1	A0A059CJK5	Uncharacterized protein.	Uncharacterized protein.	0.998
EUGRSUZ_F02336	EUGRSUZ_E03954	A0A059BRZ1	A0A059CAC3	Uncharacterized protein.	Uncharacterized protein.	0.998
EUGRSUZ_F02336	EUGRSUZ_F01999	A0A059BRZ1	A0A059BRQ3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.998