61 items (Eucalyptus grandis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EUGRSUZ_L01904	Uncharacterized protein. (400 aa)
	EUGRSUZ_L01434	Uncharacterized protein. (434 aa)
	EUGRSUZ_K01978	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (394 aa)
	EUGRSUZ_J03126	Uncharacterized protein. (497 aa)
	EUGRSUZ_J03136	Uncharacterized protein. (458 aa)
	EUGRSUZ_I01134	Uncharacterized protein. (246 aa)
	EUGRSUZ_I01579	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (484 aa)
	EUGRSUZ_H02828	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (391 aa)
	EUGRSUZ_H03914	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (389 aa)
	EUGRSUZ_H04648	Uncharacterized protein. (236 aa)
	EUGRSUZ_H04646	Uncharacterized protein. (236 aa)
	EUGRSUZ_H04643	Uncharacterized protein. (189 aa)
	EUGRSUZ_G00905	Uncharacterized protein. (434 aa)
	EUGRSUZ_G00931	Uncharacterized protein. (432 aa)
	EUGRSUZ_G00906	Uncharacterized protein. (423 aa)
	EUGRSUZ_G00910	Uncharacterized protein. (276 aa)
	EUGRSUZ_G00924	Uncharacterized protein. (254 aa)
	EUGRSUZ_G01417	Uncharacterized protein. (247 aa)
	EUGRSUZ_G00903	Uncharacterized protein. (436 aa)
	EUGRSUZ_G01526	Uncharacterized protein. (389 aa)
	EUGRSUZ_G01531	Uncharacterized protein. (423 aa)
	EUGRSUZ_G01522	Uncharacterized protein. (386 aa)
	EUGRSUZ_G01527	Uncharacterized protein. (262 aa)
	EUGRSUZ_G01532	Uncharacterized protein. (423 aa)
	EUGRSUZ_G01528	Uncharacterized protein. (392 aa)
	EUGRSUZ_G01520	Uncharacterized protein. (411 aa)
	EUGRSUZ_G01530	Uncharacterized protein. (434 aa)
	EUGRSUZ_G01529	Uncharacterized protein. (423 aa)
	EUGRSUZ_G02314	Hydrolase_4 domain-containing protein. (409 aa)
	EUGRSUZ_G02767	Hydrolase_4 domain-containing protein. (317 aa)
	EUGRSUZ_G03199	Uncharacterized protein; Belongs to the cytochrome P450 family. (508 aa)
	EUGRSUZ_F02557	Hydrolase_4 domain-containing protein. (324 aa)
	EUGRSUZ_F03973	Uncharacterized protein. (445 aa)
	EUGRSUZ_F03972	Uncharacterized protein. (445 aa)
	EUGRSUZ_F03978	Uncharacterized protein. (454 aa)
	EUGRSUZ_F03974	Uncharacterized protein. (445 aa)
	EUGRSUZ_D01635	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (393 aa)
	EUGRSUZ_D01509	Uncharacterized protein. (361 aa)
	EUGRSUZ_D01632	Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family. (393 aa)
	EUGRSUZ_C00924	Uncharacterized protein. (238 aa)
	EUGRSUZ_C00927	Uncharacterized protein. (186 aa)
	EUGRSUZ_C02267	Uncharacterized protein. (457 aa)
	EUGRSUZ_C02381	Uncharacterized protein. (229 aa)
	EUGRSUZ_C02371	Uncharacterized protein. (441 aa)
	EUGRSUZ_C02380	Uncharacterized protein. (439 aa)
	EUGRSUZ_C02375	Uncharacterized protein. (380 aa)
	EUGRSUZ_C02403	Uncharacterized protein. (439 aa)
	EUGRSUZ_C02269	Uncharacterized protein. (457 aa)
	EUGRSUZ_C02376	Uncharacterized protein. (433 aa)
	EUGRSUZ_C04213	Uncharacterized protein. (453 aa)
	EUGRSUZ_B01441	Uncharacterized protein. (463 aa)
	EUGRSUZ_B03220	Uncharacterized protein. (409 aa)
	EUGRSUZ_B03219	Uncharacterized protein. (434 aa)
	EUGRSUZ_B03224	Uncharacterized protein. (423 aa)
	EUGRSUZ_B03223	Uncharacterized protein. (396 aa)
	EUGRSUZ_B03222	Uncharacterized protein. (434 aa)
	EUGRSUZ_B03227	Uncharacterized protein. (443 aa)
	EUGRSUZ_B03452	Uncharacterized protein. (436 aa)
	EUGRSUZ_B03906	Uncharacterized protein. (461 aa)
	EUGRSUZ_A02190	Uncharacterized protein; Belongs to the cytochrome P450 family. (509 aa)
	EUGRSUZ_A02188	Uncharacterized protein; Belongs to the cytochrome P450 family. (509 aa)

Your Current Organism:

Eucalyptus grandis

NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EUGRSUZ_A02188	EUGRSUZ_A02190	A0A059DIE1	A0A059DGW8	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.900
EUGRSUZ_A02188	EUGRSUZ_B01441	A0A059DIE1	A0A059D2A8	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.659
EUGRSUZ_A02188	EUGRSUZ_B03219	A0A059DIE1	A0A059D7M3	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.650
EUGRSUZ_A02188	EUGRSUZ_B03220	A0A059DIE1	A0A059D782	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.659
EUGRSUZ_A02188	EUGRSUZ_B03222	A0A059DIE1	A0A059D8P5	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.650
EUGRSUZ_A02188	EUGRSUZ_B03223	A0A059DIE1	A0A059D857	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.659
EUGRSUZ_A02188	EUGRSUZ_B03224	A0A059DIE1	A0A059D7M7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.650
EUGRSUZ_A02188	EUGRSUZ_B03227	A0A059DIE1	A0A059D8P8	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.659
EUGRSUZ_A02188	EUGRSUZ_B03452	A0A059DIE1	A0A059D8X7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.659
EUGRSUZ_A02188	EUGRSUZ_B03906	A0A059DIE1	A0A059DAM7	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.659
EUGRSUZ_A02188	EUGRSUZ_C02267	A0A059DIE1	A0A059CR11	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.702
EUGRSUZ_A02188	EUGRSUZ_C02269	A0A059DIE1	A0A059CSI6	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.702
EUGRSUZ_A02188	EUGRSUZ_C02371	A0A059DIE1	A0A059CRL4	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.659
EUGRSUZ_A02188	EUGRSUZ_C02375	A0A059DIE1	A0A059CS26	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.659
EUGRSUZ_A02188	EUGRSUZ_C02376	A0A059DIE1	A0A059CST9	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.650
EUGRSUZ_A02188	EUGRSUZ_C02380	A0A059DIE1	A0A059CRL8	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.659
EUGRSUZ_A02188	EUGRSUZ_C02381	A0A059DIE1	A0A059CRB8	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.659
EUGRSUZ_A02188	EUGRSUZ_C02403	A0A059DIE1	A0A059CS53	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.659
EUGRSUZ_A02188	EUGRSUZ_C04213	A0A059DIE1	A0A059CWU4	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.702
EUGRSUZ_A02188	EUGRSUZ_D01509	A0A059DIE1	A0A059CFY9	Uncharacterized protein; Belongs to the cytochrome P450 family.	Uncharacterized protein.	0.659