16 items (Eucalyptus grandis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EUGRSUZ_K03421	LEC14B homolog; Belongs to the WD repeat LEC14B family. (491 aa)
	EUGRSUZ_J00843	Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (330 aa)
	EUGRSUZ_J02205	HD domain-containing protein. (472 aa)
	EUGRSUZ_I01460	Uncharacterized protein. (499 aa)
	EUGRSUZ_G01293	WD_REPEATS_REGION domain-containing protein. (827 aa)
	EUGRSUZ_G01796	Uncharacterized protein. (490 aa)
	EUGRSUZ_F02126	Uncharacterized protein. (752 aa)
	EUGRSUZ_C00279	Uncharacterized protein. (1196 aa)
	EUGRSUZ_C01581	Uncharacterized protein. (480 aa)
	EUGRSUZ_C01582	Uncharacterized protein. (474 aa)
	EUGRSUZ_C02892	Uncharacterized protein. (477 aa)
	EUGRSUZ_C03980	LisH domain-containing protein. (1885 aa)
	EUGRSUZ_B00112	SAP domain-containing protein. (224 aa)
	EUGRSUZ_B01219	Uncharacterized protein. (479 aa)
	EUGRSUZ_B01223	Uncharacterized protein. (244 aa)
	EUGRSUZ_B01222	WD_REPEATS_REGION domain-containing protein. (439 aa)

Your Current Organism:

Eucalyptus grandis

NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EUGRSUZ_B00112	EUGRSUZ_B01219	A0A059CY98	A0A059D0X3	SAP domain-containing protein.	Uncharacterized protein.	0.540
EUGRSUZ_B00112	EUGRSUZ_B01222	A0A059CY98	A0A059D2D8	SAP domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.540
EUGRSUZ_B00112	EUGRSUZ_B01223	A0A059CY98	A0A059D1T0	SAP domain-containing protein.	Uncharacterized protein.	0.540
EUGRSUZ_B00112	EUGRSUZ_C00279	A0A059CY98	A0A059CKB8	SAP domain-containing protein.	Uncharacterized protein.	0.540
EUGRSUZ_B00112	EUGRSUZ_C01581	A0A059CY98	A0A059CPR6	SAP domain-containing protein.	Uncharacterized protein.	0.540
EUGRSUZ_B00112	EUGRSUZ_C01582	A0A059CY98	A0A059CQK3	SAP domain-containing protein.	Uncharacterized protein.	0.540
EUGRSUZ_B00112	EUGRSUZ_C02892	A0A059CY98	A0A059CSV0	SAP domain-containing protein.	Uncharacterized protein.	0.540
EUGRSUZ_B00112	EUGRSUZ_C03980	A0A059CY98	A0A059CVT0	SAP domain-containing protein.	LisH domain-containing protein.	0.540
EUGRSUZ_B00112	EUGRSUZ_F02126	A0A059CY98	A0A059BQP3	SAP domain-containing protein.	Uncharacterized protein.	0.540
EUGRSUZ_B00112	EUGRSUZ_G01796	A0A059CY98	A0A059BEP2	SAP domain-containing protein.	Uncharacterized protein.	0.540
EUGRSUZ_B00112	EUGRSUZ_I01460	A0A059CY98	A0A059APA5	SAP domain-containing protein.	Uncharacterized protein.	0.540
EUGRSUZ_B00112	EUGRSUZ_K03421	A0A059CY98	A0A059A8J8	SAP domain-containing protein.	LEC14B homolog; Belongs to the WD repeat LEC14B family.	0.540
EUGRSUZ_B01219	EUGRSUZ_B00112	A0A059D0X3	A0A059CY98	Uncharacterized protein.	SAP domain-containing protein.	0.540
EUGRSUZ_B01219	EUGRSUZ_B01222	A0A059D0X3	A0A059D2D8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.544
EUGRSUZ_B01219	EUGRSUZ_B01223	A0A059D0X3	A0A059D1T0	Uncharacterized protein.	Uncharacterized protein.	0.547
EUGRSUZ_B01219	EUGRSUZ_C00279	A0A059D0X3	A0A059CKB8	Uncharacterized protein.	Uncharacterized protein.	0.540
EUGRSUZ_B01219	EUGRSUZ_C01581	A0A059D0X3	A0A059CPR6	Uncharacterized protein.	Uncharacterized protein.	0.540
EUGRSUZ_B01219	EUGRSUZ_C01582	A0A059D0X3	A0A059CQK3	Uncharacterized protein.	Uncharacterized protein.	0.540
EUGRSUZ_B01219	EUGRSUZ_C02892	A0A059D0X3	A0A059CSV0	Uncharacterized protein.	Uncharacterized protein.	0.540
EUGRSUZ_B01219	EUGRSUZ_C03980	A0A059D0X3	A0A059CVT0	Uncharacterized protein.	LisH domain-containing protein.	0.540