(32 nodes) (2019) Transcriptome Analysis of Chinese Chestnut (Castanea mollissima Blume) in Response to Dryocosmus kuriphilus Yasumatsu Infestation. network (Eucalyptus grandis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EUGRSUZ_H04646	Uncharacterized protein. (236 aa)
	EUGRSUZ_H04650	Uncharacterized protein. (235 aa)
	EUGRSUZ_H04643	Uncharacterized protein. (189 aa)
	EUGRSUZ_G01417	Uncharacterized protein. (247 aa)
	EUGRSUZ_G02848	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_G02852	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_G02849	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_G02851	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_G02850	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_E00579	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (250 aa)
	EUGRSUZ_D01857	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (168 aa)
	EUGRSUZ_D01856	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (170 aa)
	EUGRSUZ_C00924	Uncharacterized protein. (238 aa)
	EUGRSUZ_C00927	Uncharacterized protein. (186 aa)
	EUGRSUZ_C00925	Uncharacterized protein. (238 aa)
	EUGRSUZ_C02602	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (276 aa)
	EUGRSUZ_C03680	Uncharacterized protein. (253 aa)
	EUGRSUZ_C03932	Uncharacterized protein. (97 aa)
	EUGRSUZ_C03570	Phenylalanine ammonia-lyase. (703 aa)
	EUGRSUZ_A00055	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (204 aa)
	EUGRSUZ_A00257	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (202 aa)
	EUGRSUZ_A01144	Phenylalanine ammonia-lyase. (708 aa)
	EUGRSUZ_B02687	Uncharacterized protein. (233 aa)
	EUGRSUZ_K01841	Uncharacterized protein. (377 aa)
	EUGRSUZ_J00015	Uncharacterized protein. (377 aa)
	EUGRSUZ_K03389	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (170 aa)
	EUGRSUZ_J01079	Phenylalanine ammonia-lyase. (715 aa)
	EUGRSUZ_J00907	Uncharacterized protein; Belongs to the PAL/histidase family. (723 aa)
	EUGRSUZ_I01134	Uncharacterized protein. (246 aa)
	EUGRSUZ_H01518	Glutathione peroxidase; Belongs to the glutathione peroxidase family. (170 aa)
	EUGRSUZ_H04648	Uncharacterized protein. (236 aa)
	EUGRSUZ_H04644	Uncharacterized protein. (136 aa)

Your Current Organism:

Eucalyptus grandis

NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EUGRSUZ_A01144	EUGRSUZ_B02687	A0A059DDG3	A0A059D711	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C00924	A0A059DDG3	A0A059CM74	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C00925	A0A059DDG3	A0A059CMV0	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C00927	A0A059DDG3	A0A059CMG4	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C03680	A0A059DDG3	A0A059CUV2	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C03932	A0A059DDG3	A0A059CVZ1	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_G01417	A0A059DDG3	A0A059BC07	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.625
EUGRSUZ_A01144	EUGRSUZ_H04643	A0A059DDG3	A0A059B8J1	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_H04644	A0A059DDG3	A0A059B7W5	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_H04646	A0A059DDG3	A0A059B7W9	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_H04648	A0A059DDG3	A0A059B780	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_H04650	A0A059DDG3	A0A059B7X2	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_I01134	A0A059DDG3	A0A059AMV7	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.625
EUGRSUZ_B02687	EUGRSUZ_A01144	A0A059D711	A0A059DDG3	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.585
EUGRSUZ_B02687	EUGRSUZ_C03570	A0A059D711	A0A059CW46	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.640
EUGRSUZ_B02687	EUGRSUZ_G02848	A0A059D711	A0A059BGW1	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.585
EUGRSUZ_B02687	EUGRSUZ_G02849	A0A059D711	A0A059BHE6	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.585
EUGRSUZ_B02687	EUGRSUZ_G02850	A0A059D711	A0A059BIF0	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.585
EUGRSUZ_B02687	EUGRSUZ_G02851	A0A059D711	A0A059BHV5	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.585
EUGRSUZ_B02687	EUGRSUZ_G02852	A0A059D711	A0A059BGW5	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.585