42 items (Eucalyptus grandis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EUGRSUZ_J01079	Phenylalanine ammonia-lyase. (715 aa)
	EUGRSUZ_J00907	Uncharacterized protein; Belongs to the PAL/histidase family. (723 aa)
	EUGRSUZ_J03114	Epimerase domain-containing protein. (421 aa)
	EUGRSUZ_I01134	Uncharacterized protein. (246 aa)
	EUGRSUZ_H04648	Uncharacterized protein. (236 aa)
	EUGRSUZ_H04644	Uncharacterized protein. (136 aa)
	EUGRSUZ_H04646	Uncharacterized protein. (236 aa)
	EUGRSUZ_H04650	Uncharacterized protein. (235 aa)
	EUGRSUZ_H04643	Uncharacterized protein. (189 aa)
	EUGRSUZ_G01417	Uncharacterized protein. (247 aa)
	EUGRSUZ_G02848	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_G02852	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_G02849	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_G03132	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (234 aa)
	EUGRSUZ_G02851	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_G02850	Phenylalanine ammonia-lyase. (714 aa)
	A0A059CEA0	Uncharacterized protein. (171 aa)
	EUGRSUZ_D01149	Uncharacterized protein; Belongs to the sterol desaturase family. (620 aa)
	EUGRSUZ_D01172	Uncharacterized protein; Belongs to the sterol desaturase family. (627 aa)
	A0A059CF41	Wax2_C domain-containing protein. (374 aa)
	EUGRSUZ_D01152	Uncharacterized protein; Belongs to the sterol desaturase family. (627 aa)
	EUGRSUZ_D01151	Uncharacterized protein; Belongs to the sterol desaturase family. (536 aa)
	EUGRSUZ_D02624	Uncharacterized protein. (542 aa)
	EUGRSUZ_C00924	Uncharacterized protein. (238 aa)
	EUGRSUZ_C00927	Uncharacterized protein. (186 aa)
	EUGRSUZ_C00925	Uncharacterized protein. (238 aa)
	EUGRSUZ_C02284	Uncharacterized protein. (544 aa)
	EUGRSUZ_C03680	Uncharacterized protein. (253 aa)
	EUGRSUZ_C03932	Uncharacterized protein. (97 aa)
	EUGRSUZ_C03570	Phenylalanine ammonia-lyase. (703 aa)
	EUGRSUZ_B00135	Uncharacterized protein. (560 aa)
	EUGRSUZ_B02687	Uncharacterized protein. (233 aa)
	EUGRSUZ_B03502	Uncharacterized protein. (555 aa)
	EUGRSUZ_B03664	Uncharacterized protein. (604 aa)
	EUGRSUZ_B03942	Uncharacterized protein. (626 aa)
	EUGRSUZ_B03943	Uncharacterized protein. (670 aa)
	EUGRSUZ_A01144	Phenylalanine ammonia-lyase. (708 aa)
	EUGRSUZ_J00124	Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (241 aa)
	EUGRSUZ_K02929	Uncharacterized protein. (549 aa)
	EUGRSUZ_K02927	Uncharacterized protein. (548 aa)
	EUGRSUZ_K00087	Uncharacterized protein. (517 aa)
	EUGRSUZ_L02074	Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family. (398 aa)

Your Current Organism:

Eucalyptus grandis

NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A059CEA0	A0A059CF41	A0A059CEA0	A0A059CF41	Uncharacterized protein.	Wax2_C domain-containing protein.	0.549
A0A059CF41	A0A059CEA0	A0A059CF41	A0A059CEA0	Wax2_C domain-containing protein.	Uncharacterized protein.	0.549
EUGRSUZ_A01144	EUGRSUZ_B00135	A0A059DDG3	A0A059CYC0	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.874
EUGRSUZ_A01144	EUGRSUZ_B02687	A0A059DDG3	A0A059D711	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_B03502	A0A059DDG3	A0A059D8Z9	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.867
EUGRSUZ_A01144	EUGRSUZ_B03942	A0A059DDG3	A0A059D9T8	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.859
EUGRSUZ_A01144	EUGRSUZ_B03943	A0A059DDG3	A0A059DAI7	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.859
EUGRSUZ_A01144	EUGRSUZ_C00924	A0A059DDG3	A0A059CM74	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C00925	A0A059DDG3	A0A059CMV0	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C00927	A0A059DDG3	A0A059CMG4	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C02284	A0A059DDG3	A0A059CRW7	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.859
EUGRSUZ_A01144	EUGRSUZ_C03680	A0A059DDG3	A0A059CUV2	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C03932	A0A059DDG3	A0A059CVZ1	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_D02624	A0A059DDG3	A0A059CJ66	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.869
EUGRSUZ_A01144	EUGRSUZ_G01417	A0A059DDG3	A0A059BC07	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.625
EUGRSUZ_A01144	EUGRSUZ_H04643	A0A059DDG3	A0A059B8J1	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_H04644	A0A059DDG3	A0A059B7W5	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_H04646	A0A059DDG3	A0A059B7W9	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_H04648	A0A059DDG3	A0A059B780	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_H04650	A0A059DDG3	A0A059B7X2	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585