(65 nodes) (2022) Transcriptomic Evidence Reveals Low Gelatinous Layer Biosynthesis in Neolamarckia cadamba after Gravistimulation. network (Eucalyptus grandis)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EUGRSUZ_H00564	Annexin. (314 aa)
	EUGRSUZ_H03936	NAD(P)-bd_dom domain-containing protein. (352 aa)
	EUGRSUZ_H04648	Uncharacterized protein. (236 aa)
	EUGRSUZ_H04787	Annexin. (316 aa)
	EUGRSUZ_H04644	Uncharacterized protein. (136 aa)
	EUGRSUZ_H04646	Uncharacterized protein. (236 aa)
	EUGRSUZ_H04650	Uncharacterized protein. (235 aa)
	EUGRSUZ_H04643	Uncharacterized protein. (189 aa)
	EUGRSUZ_G01417	Uncharacterized protein. (247 aa)
	EUGRSUZ_G02157	Uncharacterized protein; Belongs to the phosphohexose mutase family. (583 aa)
	EUGRSUZ_G02848	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_G02852	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_G02849	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_G02851	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_G02850	Phenylalanine ammonia-lyase. (714 aa)
	EUGRSUZ_G03248	Annexin. (398 aa)
	EUGRSUZ_F01231	Uncharacterized protein. (763 aa)
	WOX4	WOX4. (232 aa)
	EUGRSUZ_F02423	Annexin. (316 aa)
	EUGRSUZ_F02429	Annexin. (275 aa)
	EUGRSUZ_F02479	Uncharacterized protein. (256 aa)
	EUGRSUZ_F02901	Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (416 aa)
	EUGRSUZ_F03862	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (773 aa)
	EUGRSUZ_F03658	Uncharacterized protein. (758 aa)
	EUGRSUZ_D02110	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (961 aa)
	EUGRSUZ_D02465	3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family. (513 aa)
	EUGRSUZ_C00140	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (954 aa)
	EUGRSUZ_C00401	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (950 aa)
	EUGRSUZ_C00924	Uncharacterized protein. (238 aa)
	EUGRSUZ_C00927	Uncharacterized protein. (186 aa)
	EUGRSUZ_C00925	Uncharacterized protein. (238 aa)
	EUGRSUZ_C01746	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (831 aa)
	EUGRSUZ_C02092	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (954 aa)
	A0A059CSU6	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (935 aa)
	EUGRSUZ_C03680	Uncharacterized protein. (253 aa)
	EUGRSUZ_C03932	Uncharacterized protein. (97 aa)
	EUGRSUZ_C03570	Phenylalanine ammonia-lyase. (703 aa)
	EUGRSUZ_C04061	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (951 aa)
	EUGRSUZ_C04222	Phospholipase D; Hydrolyzes glycerol-phospholipids at the terminal phosphodiesteric bond. (810 aa)
	EUGRSUZ_C04266	Uncharacterized protein. (782 aa)
	EUGRSUZ_B00400	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (955 aa)
	EUGRSUZ_B02942	Uncharacterized protein. (642 aa)
	EUGRSUZ_B02687	Uncharacterized protein. (233 aa)
	EUGRSUZ_A01144	Phenylalanine ammonia-lyase. (708 aa)
	EUGRSUZ_A02374	Uncharacterized protein. (754 aa)
	EUGRSUZ_L01717	Annexin. (269 aa)
	EUGRSUZ_K00185	Uncharacterized protein. (673 aa)
	EUGRSUZ_K01841	Uncharacterized protein. (377 aa)
	EUGRSUZ_K02813	Uncharacterized protein. (785 aa)
	EUGRSUZ_K02916	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (956 aa)
	EUGRSUZ_K02748	Malate synthase; Belongs to the malate synthase family. (569 aa)
	EUGRSUZ_J00015	Uncharacterized protein. (377 aa)
	UXS1	NAD(P)-bd_dom domain-containing protein. (346 aa)
	EUGRSUZ_J01079	Phenylalanine ammonia-lyase. (715 aa)
	EUGRSUZ_J00907	Uncharacterized protein; Belongs to the PAL/histidase family. (723 aa)
	EUGRSUZ_J01192	Annexin. (334 aa)
	EUGRSUZ_J01193	Annexin. (314 aa)
	EUGRSUZ_J02223	Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family. (490 aa)
	EUGRSUZ_J02233	Uncharacterized protein. (770 aa)
	EUGRSUZ_J03094	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (929 aa)
	EUGRSUZ_I01134	Uncharacterized protein. (246 aa)
	EUGRSUZ_I01757	Uncharacterized protein. (839 aa)
	EUGRSUZ_I01911	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (963 aa)
	A0A059ARF2	Uncharacterized protein. (327 aa)
	EUGRSUZ_I02171	Plasma membrane ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IIIA subfamily. (952 aa)

Your Current Organism:

Eucalyptus grandis

NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EUGRSUZ_A01144	EUGRSUZ_B02687	A0A059DDG3	A0A059D711	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C00924	A0A059DDG3	A0A059CM74	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C00925	A0A059DDG3	A0A059CMV0	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C00927	A0A059DDG3	A0A059CMG4	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C03680	A0A059DDG3	A0A059CUV2	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_C03932	A0A059DDG3	A0A059CVZ1	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_G01417	A0A059DDG3	A0A059BC07	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.625
EUGRSUZ_A01144	EUGRSUZ_H04643	A0A059DDG3	A0A059B8J1	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_H04644	A0A059DDG3	A0A059B7W5	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_H04646	A0A059DDG3	A0A059B7W9	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_H04648	A0A059DDG3	A0A059B780	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_H04650	A0A059DDG3	A0A059B7X2	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.585
EUGRSUZ_A01144	EUGRSUZ_I01134	A0A059DDG3	A0A059AMV7	Phenylalanine ammonia-lyase.	Uncharacterized protein.	0.625
EUGRSUZ_A02374	EUGRSUZ_K00185	A0A059DIH6	A0A058ZXZ1	Uncharacterized protein.	Uncharacterized protein.	0.447
EUGRSUZ_B02687	EUGRSUZ_A01144	A0A059D711	A0A059DDG3	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.585
EUGRSUZ_B02687	EUGRSUZ_C03570	A0A059D711	A0A059CW46	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.640
EUGRSUZ_B02687	EUGRSUZ_G02848	A0A059D711	A0A059BGW1	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.585
EUGRSUZ_B02687	EUGRSUZ_G02849	A0A059D711	A0A059BHE6	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.585
EUGRSUZ_B02687	EUGRSUZ_G02850	A0A059D711	A0A059BIF0	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.585
EUGRSUZ_B02687	EUGRSUZ_G02851	A0A059D711	A0A059BHV5	Uncharacterized protein.	Phenylalanine ammonia-lyase.	0.585