(25 nodes) Lissencephaly type-1-like homology motif network (Eucalyptus grandis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	EUGRSUZ_C02214	LisH domain-containing protein. (506 aa)
	EUGRSUZ_C02661	Uncharacterized protein. (772 aa)
	A0A059CSY5	WD_REPEATS_REGION domain-containing protein. (899 aa)
	EUGRSUZ_C03980	LisH domain-containing protein. (1885 aa)
	EUGRSUZ_C04148	Uncharacterized protein. (629 aa)
	EUGRSUZ_B02075	Uncharacterized protein. (1131 aa)
	EUGRSUZ_A02037	Uncharacterized protein. (584 aa)
	EUGRSUZ_H00067	Uncharacterized protein. (785 aa)
	EUGRSUZ_F03923	Uncharacterized protein. (1137 aa)
	EUGRSUZ_F02790	Uncharacterized protein. (1183 aa)
	EUGRSUZ_E01768	Uncharacterized protein. (515 aa)
	EUGRSUZ_C00279	Uncharacterized protein. (1196 aa)
	A0A059CNV6	Uncharacterized protein. (489 aa)
	EUGRSUZ_F02579	Uncharacterized protein. (481 aa)
	EUGRSUZ_F01851	CTLH domain-containing protein. (213 aa)
	EUGRSUZ_H03269	Uncharacterized protein. (1138 aa)
	EUGRSUZ_H02406	CTLH domain-containing protein. (386 aa)
	EUGRSUZ_H00847	Uncharacterized protein. (524 aa)
	EUGRSUZ_I00742	Uncharacterized protein. (620 aa)
	EUGRSUZ_J03067	Uncharacterized protein. (1105 aa)
	EUGRSUZ_J01137	LisH domain-containing protein. (262 aa)
	EUGRSUZ_J01144	Uncharacterized protein. (480 aa)
	EUGRSUZ_K00093	Uncharacterized protein. (1136 aa)
	EUGRSUZ_L01054	Uncharacterized protein. (524 aa)
	EUGRSUZ_L02006	Uncharacterized protein. (239 aa)

Your Current Organism:

Eucalyptus grandis

NCBI taxonomy Id: 71139
Other names: E. grandis, Eucalyptus grandis W.Hill ex Maiden, rose gum

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EUGRSUZ_A02037	EUGRSUZ_F01851	A0A059DH98	A0A059BPQ9	Uncharacterized protein.	CTLH domain-containing protein.	0.747
EUGRSUZ_A02037	EUGRSUZ_F02579	A0A059DH98	A0A059BS00	Uncharacterized protein.	Uncharacterized protein.	0.930
EUGRSUZ_A02037	EUGRSUZ_H02406	A0A059DH98	A0A059B0K6	Uncharacterized protein.	CTLH domain-containing protein.	0.899
EUGRSUZ_A02037	EUGRSUZ_J01144	A0A059DH98	A0A059AC41	Uncharacterized protein.	Uncharacterized protein.	0.668
EUGRSUZ_A02037	EUGRSUZ_L02006	A0A059DH98	A0A058ZTY9	Uncharacterized protein.	Uncharacterized protein.	0.747
EUGRSUZ_C00279	EUGRSUZ_C03980	A0A059CKB8	A0A059CVT0	Uncharacterized protein.	LisH domain-containing protein.	0.543
EUGRSUZ_C02214	EUGRSUZ_L02006	A0A059CSD3	A0A058ZTY9	LisH domain-containing protein.	Uncharacterized protein.	0.456
EUGRSUZ_C03980	EUGRSUZ_C00279	A0A059CVT0	A0A059CKB8	LisH domain-containing protein.	Uncharacterized protein.	0.543
EUGRSUZ_C04148	EUGRSUZ_F03923	A0A059CWM1	A0A059BWY5	Uncharacterized protein.	Uncharacterized protein.	0.403
EUGRSUZ_F01851	EUGRSUZ_A02037	A0A059BPQ9	A0A059DH98	CTLH domain-containing protein.	Uncharacterized protein.	0.747
EUGRSUZ_F01851	EUGRSUZ_F02579	A0A059BPQ9	A0A059BS00	CTLH domain-containing protein.	Uncharacterized protein.	0.912
EUGRSUZ_F01851	EUGRSUZ_H00847	A0A059BPQ9	A0A059AWJ2	CTLH domain-containing protein.	Uncharacterized protein.	0.747
EUGRSUZ_F01851	EUGRSUZ_H02406	A0A059BPQ9	A0A059B0K6	CTLH domain-containing protein.	CTLH domain-containing protein.	0.896
EUGRSUZ_F01851	EUGRSUZ_J01144	A0A059BPQ9	A0A059AC41	CTLH domain-containing protein.	Uncharacterized protein.	0.900
EUGRSUZ_F01851	EUGRSUZ_L01054	A0A059BPQ9	A0A058ZTZ1	CTLH domain-containing protein.	Uncharacterized protein.	0.747
EUGRSUZ_F02579	EUGRSUZ_A02037	A0A059BS00	A0A059DH98	Uncharacterized protein.	Uncharacterized protein.	0.930
EUGRSUZ_F02579	EUGRSUZ_F01851	A0A059BS00	A0A059BPQ9	Uncharacterized protein.	CTLH domain-containing protein.	0.912
EUGRSUZ_F02579	EUGRSUZ_H00847	A0A059BS00	A0A059AWJ2	Uncharacterized protein.	Uncharacterized protein.	0.930
EUGRSUZ_F02579	EUGRSUZ_H02406	A0A059BS00	A0A059B0K6	Uncharacterized protein.	CTLH domain-containing protein.	0.950
EUGRSUZ_F02579	EUGRSUZ_J01144	A0A059BS00	A0A059AC41	Uncharacterized protein.	Uncharacterized protein.	0.942