28 items (Leptotrichia) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ALA94678.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (188 aa)
	ALA94680.1	Phosphoenolpyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (905 aa)
	ALA94681.1	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
	ALA94682.1	Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (443 aa)
	ALA94683.1	GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	ALA94684.1	Peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (512 aa)
	ALA94685.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)
	ALA94686.1	Prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (360 aa)
	ALA94943.1	Peptidase M50; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)
	ALA94957.1	UDP pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. (235 aa)
	ALA94958.1	Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
	ALA94960.1	Mevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	ALA94961.1	Diphosphomevalonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	ALA96574.1	Phosphomevalonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
	fni	Isopentenyl pyrophosphate isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP). (332 aa)
	ALA94963.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)
	ALA96603.1	Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
	ALA96619.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa)
	ALA96623.1	Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)
	ALA95329.1	3-hydroxy-3-methylglutaryl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HMG-CoA reductase family. (435 aa)
	ALA95330.1	DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (389 aa)
	ALA95367.1	Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. (249 aa)
	ALA95571.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (182 aa)
	ALA95673.1	RNA polymerase subunit sigma-32; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (273 aa)
	gpsA	Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (339 aa)
	plsY	Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. (206 aa)
	ALA95989.1	PA-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (224 aa)
	ALA96093.1	Geranyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family. (290 aa)

Your Current Organism:

Leptotrichia

NCBI taxonomy Id: 712357
Other names: L. sp. oral taxon 212, Leptotrichia sp. oral taxon 212

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALA94678.1	ALA94680.1	AMK43_00190	AMK43_00200	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoenolpyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
ALA94678.1	ALA94681.1	AMK43_00190	AMK43_00205	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
ALA94678.1	ALA94682.1	AMK43_00190	AMK43_00210	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
ALA94680.1	ALA94678.1	AMK43_00200	AMK43_00190	Phosphoenolpyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.513
ALA94680.1	ALA94681.1	AMK43_00200	AMK43_00205	Phosphoenolpyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
ALA94680.1	ALA94682.1	AMK43_00200	AMK43_00210	Phosphoenolpyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.750
ALA94680.1	ALA94683.1	AMK43_00200	AMK43_00215	Phosphoenolpyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.827
ALA94680.1	ALA94684.1	AMK43_00200	AMK43_00220	Phosphoenolpyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.633
ALA94680.1	ALA94686.1	AMK43_00200	AMK43_00230	Phosphoenolpyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.818
ALA94681.1	ALA94678.1	AMK43_00205	AMK43_00190	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
ALA94681.1	ALA94680.1	AMK43_00205	AMK43_00200	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoenolpyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.774
ALA94681.1	ALA94682.1	AMK43_00205	AMK43_00210	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.892
ALA94681.1	ALA94683.1	AMK43_00205	AMK43_00215	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.873
ALA94681.1	ALA94684.1	AMK43_00205	AMK43_00220	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.805
ALA94681.1	ALA94685.1	AMK43_00205	AMK43_00225	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.401
ALA94681.1	ALA94686.1	AMK43_00205	AMK43_00230	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Prenyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.843
ALA94681.1	ALA96603.1	AMK43_00205	AMK43_03095	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.907
ALA94681.1	ALA96623.1	AMK43_00205	AMK43_04105	S-adenosylmethionine:diacylglycerol 3-amino-3-carboxypropyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diacylglycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
ALA94682.1	ALA94678.1	AMK43_00210	AMK43_00190	Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.412
ALA94682.1	ALA94680.1	AMK43_00210	AMK43_00200	Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phosphoenolpyruvate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.750