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| | ruvC | Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (189 aa) |
| | rnpA | Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (108 aa) |
| | ALA94689.1 | D,D-heptose 1,7-bisphosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (190 aa) |
| | ALA94690.1 | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein. (472 aa) |
| | ALA94742.1 | Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa) |
| | ALA94744.1 | Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (488 aa) |
| | ALA96541.1 | Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa) |
| | ALA94776.1 | Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family. (215 aa) |
| | ALA94825.1 | Histidinol phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily. (265 aa) |
| | ALA94849.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (668 aa) |
| | ileS | isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily. (931 aa) |
| | ALA94863.1 | Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa) |
| | ALA94871.1 | Acid phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa) |
| | rnj | Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. (624 aa) |
| | ALA94903.1 | Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa) |
| | ALA94905.1 | Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa) |
| | ALA96568.1 | Histidinol phosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily. (285 aa) |
| | ALA94971.1 | Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. (203 aa) |
| | mutS2 | DNA mismatch repair protein MutS; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (779 aa) |
| | ALA94991.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa) |
| | valS | valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (883 aa) |
| | ALA95035.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (920 aa) |
| | ALA95101.1 | Acetyl xylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (320 aa) |
| | ALA95107.1 | CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (232 aa) |
| | ALA95110.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa) |
| | uvrB | Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (657 aa) |
| | ALA95134.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa) |
| | pth | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. (188 aa) |
| | ALA96474.1 | Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (154 aa) |
| | ALA96749.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (481 aa) |
| | rnr | Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. (714 aa) |
| | ALA96376.1 | Hydrolase TatD; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa) |
| | ALA96320.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa) |
| | ALA96319.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0310 family. (133 aa) |
| | ALA96315.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa) |
| | ALA96284.1 | Toxin HicA; Derived by automated computational analysis using gene prediction method: Protein Homology. (63 aa) |
| | ALA96734.1 | Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. (711 aa) |
| | ALA96172.1 | Single-stranded DNA exonuclease RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (958 aa) |
| | proS | prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...] (570 aa) |
| | ALA96718.1 | Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (263 aa) |
| | ALA96149.1 | DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. (1157 aa) |
| | xseB | Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (73 aa) |
| | ALA96084.1 | Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa) |
| | nth | Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (233 aa) |
| | ALA96064.1 | Addiction module protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa) |
| | ALA96055.1 | cysteinyl-tRNA(Pro) deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (163 aa) |
| | ALA96033.1 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. (164 aa) |
| | ALA96026.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa) |
| | ALA96019.1 | Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa) |
| | ALA96010.1 | CRISPR-associated protein Cas6; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa) |
| | ALA96005.1 | CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family. (162 aa) |
| | cas1 | CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (330 aa) |
| | cas2 | CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (92 aa) |
| | ALA95996.1 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa) |
| | ALA95968.1 | Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa) |
| | alaS | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. (870 aa) |
| | ALA95948.1 | Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (138 aa) |
| | rph | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (221 aa) |
| | ALA95886.1 | Fis family transcriptional regulator; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination. (165 aa) |
| | ALA96688.1 | prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa) |
| | polC | DNA polymerase III; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (1436 aa) |
| | uvrC | DNA helicase UvrC; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (593 aa) |
| | rny | Ribonuclease; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family. (524 aa) |
| | ALA96677.1 | Metallophosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (259 aa) |
| | uvrA | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (941 aa) |
| | dtd | tyrosyl-tRNA deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family. (145 aa) |
| | ALA95783.1 | Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology. (1027 aa) |
| | ALA96668.1 | Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa) |
| | nfo | Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (302 aa) |
| | ALA95744.1 | 3',5'-cyclic-nucleotide phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa) |
| | fbp | Class 3; catalyzes the formation of fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology. (645 aa) |
| | ALA95672.1 | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (374 aa) |
| | ALA95603.1 | DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology. (196 aa) |
| | ALA96646.1 | Deoxyguanosinetriphosphate triphosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (489 aa) |
| | pnp | Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (714 aa) |
| | rnc | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (234 aa) |
| | ALA95517.1 | Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (271 aa) |
| | ALA95486.1 | Histidinol phosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily. (256 aa) |
| | ALA95484.1 | Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa) |
| | ALA95465.1 | Histidinol phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily. (286 aa) |
| | ALA95458.1 | Recombination protein RecJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (558 aa) |
| | ALA95385.1 | Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (768 aa) |
| | ALA95371.1 | Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa) |
| | rnmV | DNA primase; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. (183 aa) |
| | ybeY | rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (154 aa) |
| | leuS | leucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family. (895 aa) |
