STRINGSTRING
ALA95270.1 ALA95270.1 kdsA kdsA ALA95356.1 ALA95356.1 dapB dapB ALA95363.1 ALA95363.1 fabV fabV ALA95371.1 ALA95371.1 ALA96631.1 ALA96631.1 ALA95424.1 ALA95424.1 ALA95425.1 ALA95425.1 ALA95426.1 ALA95426.1 ALA95452.1 ALA95452.1 thrB thrB ALA95480.1 ALA95480.1 fabH fabH ALA95547.1 ALA95547.1 acpP acpP ALA95549.1 ALA95549.1 ALA95615.1 ALA95615.1 ALA95631.1 ALA95631.1 ALA95640.1 ALA95640.1 ALA95660.1 ALA95660.1 fabZ fabZ ALA96658.1 ALA96658.1 ALA95713.1 ALA95713.1 ALA95741.1 ALA95741.1 ALA95742.1 ALA95742.1 serS serS metAA metAA ALA95827.1 ALA95827.1 aroQ aroQ aroK aroK aroE aroE asd asd dapF dapF ALA95913.1 ALA95913.1 lysA lysA ALA95919.1 ALA95919.1 glyA glyA asnA asnA accA accA accD accD ALA95945.1 ALA95945.1 ilvC ilvC leuB leuB leuD leuD leuC leuC ALA95966.1 ALA95966.1 ALA95979.1 ALA95979.1 ALA95981.1 ALA95981.1 ilvD ilvD ALA96702.1 ALA96702.1 aroC aroC aroA aroA aroB aroB ALA96711.1 ALA96711.1 proC proC proA proA proB proB ALA96148.1 ALA96148.1 ALA96721.1 ALA96721.1 ALA96165.1 ALA96165.1 ALA96180.1 ALA96180.1 ALA96207.1 ALA96207.1 ALA96242.1 ALA96242.1 ALA96730.1 ALA96730.1 ALA96247.1 ALA96247.1 ALA96265.1 ALA96265.1 folD folD acpS acpS ALA96383.1 ALA96383.1 ALA96397.1 ALA96397.1 ALA96398.1 ALA96398.1 ALA96448.1 ALA96448.1 ALA96466.1 ALA96466.1 ALA94742.1 ALA94742.1 metE metE ALA94757.1 ALA94757.1 ALA96550.1 ALA96550.1 ALA94875.1 ALA94875.1 trpA trpA trpB trpB trpF trpF ALA94918.1 ALA94918.1 trpD trpD ALA96568.1 ALA96568.1 ALA95006.1 ALA95006.1 ALA95091.1 ALA95091.1 ALA95146.1 ALA95146.1 ALA96616.1 ALA96616.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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ALA95270.1Phosphorylase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. (225 aa)
kdsA2-dehydro-3-deoxyphosphooctonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family. (278 aa)
ALA95356.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (383 aa)
dapBDihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family. (242 aa)
ALA95363.12,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate. (231 aa)
fabVtrans-2-enoyl-CoA reductase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. (397 aa)
ALA95371.1Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
ALA96631.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
ALA95424.1Diaminopropionate ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology. (404 aa)
ALA95425.1Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. (437 aa)
ALA95426.1Ornithine carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. (401 aa)
ALA95452.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (181 aa)
thrBSerine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. (302 aa)
ALA95480.1Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
fabH3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (325 aa)
ALA95547.1Malonyl CoA-ACP transacylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
acpPAcyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (74 aa)
ALA95549.13-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (411 aa)
ALA95615.1Carbamoylphosphate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
ALA95631.1Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. (400 aa)
ALA95640.1Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. (330 aa)
ALA95660.1Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
fabZ3-hydroxyacyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (141 aa)
ALA96658.1Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. (1142 aa)
ALA95713.1Acetylornithine deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
ALA95741.1Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. (406 aa)
ALA95742.1Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
serSHypothetical protein; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). (423 aa)
metAAHomoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. (307 aa)
ALA95827.1Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. (160 aa)
aroQ3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family. (146 aa)
aroKShikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family. (167 aa)
aroEShikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (271 aa)
asdAspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (332 aa)
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (283 aa)
ALA95913.1Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family. (400 aa)
lysADiaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine. (435 aa)
ALA95919.1Isocitrate dehydrogenase; Catalyzes the formation of 2-oxoglutarate from isocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology. (334 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (414 aa)
asnAAsparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)
accAacetyl-CoA carboxyl transferase; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (318 aa)
accDacetyl-CoA carboxyl transferase; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (283 aa)
ALA95945.1Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. (359 aa)
ilvCKetol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. (336 aa)
leuB3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. (352 aa)
leuDIsopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. (191 aa)
leuCIsopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (472 aa)
ALA95966.13-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (309 aa)
ALA95979.1Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (162 aa)
ALA95981.1Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; Derived by automated computational analysis using gene prediction method: Protein Homology. (405 aa)
ilvDDihydroxy-acid dehydratase; Catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family. (554 aa)
ALA96702.1[FeFe] hydrogenase H-cluster radical SAM maturase HydE; Derived by automated computational analysis using gene prediction method: Protein Homology. (345 aa)
aroCChorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. (368 aa)
aroA3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. (431 aa)
aroB3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). (363 aa)
ALA96711.1Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
proCPyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. (266 aa)
proAGamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. (419 aa)
proBGamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. (381 aa)
ALA96148.1Biotin attachment protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)
ALA96721.1methylcobamide:CoM methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (138 aa)
ALA96165.15-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (222 aa)
ALA96180.1Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (236 aa)
ALA96207.1Selenophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (273 aa)
ALA96242.1Glycine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
ALA96730.1Glycine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (507 aa)
ALA96247.1Carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)
ALA96265.1acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (158 aa)
folD5,10-methylene-tetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (282 aa)
acpS4'-phosphopantetheinyl transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family. (122 aa)
ALA96383.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (216 aa)
ALA96397.1Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (182 aa)
ALA96398.1Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (303 aa)
ALA96448.1Carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (425 aa)
ALA96466.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (194 aa)
ALA94742.1Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (213 aa)
metE5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. (762 aa)
ALA94757.15-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
ALA96550.1GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (157 aa)
ALA94875.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (165 aa)
trpATryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (253 aa)
trpBTryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (405 aa)
trpFN-(5'-phosphoribosyl)anthranilate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpF family. (221 aa)
ALA94918.1Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family. (242 aa)
trpDAnthranilate synthase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). (547 aa)
ALA96568.1Histidinol phosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP hydrolase family. HisK subfamily. (285 aa)
ALA95006.1Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
ALA95091.1Folylpolyglutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the folylpolyglutamate synthase family. (429 aa)
ALA95146.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (287 aa)
ALA96616.1Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology. (385 aa)
Your Current Organism:
Leptotrichia
NCBI taxonomy Id: 712357
Other names: L. sp. oral taxon 212, Leptotrichia sp. oral taxon 212
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