(14 nodes) Glutamate metabolic process, and Lysine biosynthesis network (Selenomonas)

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Predicted Interactions

gene neighborhood

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protein homology

Your Input:
	AME02775.1	Carboxynorspermidine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (378 aa)
	AME02776.1	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (399 aa)
	AME02778.1	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (409 aa)
	AME02779.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (101 aa)
	AME02782.1	Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (270 aa)
	AME03168.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RemA family. (83 aa)
	AME03169.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (293 aa)
	dapF	Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. (279 aa)
	AME03209.1	Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate. (326 aa)
	AME03909.1	Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (419 aa)
	AME03961.1	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)
	AME03962.1	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family. (501 aa)
	AME03963.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (363 aa)
	AME03964.1	LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily. (394 aa)

Your Current Organism:

Selenomonas

NCBI taxonomy Id: 713030
Other names: S. sp. oral taxon 136, Selenomonas sp. oral taxon 136

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AME02775.1	AME02776.1	AXE86_01005	AXE86_01010	Carboxynorspermidine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958
AME02776.1	AME02775.1	AXE86_01010	AXE86_01005	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Carboxynorspermidine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958
AME02776.1	AME03909.1	AXE86_01010	AXE86_07410	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
AME02778.1	AME02779.1	AXE86_01020	AXE86_01025	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.625
AME02778.1	AME02782.1	AXE86_01020	AXE86_01040	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.628
AME02778.1	AME03961.1	AXE86_01020	AXE86_07680	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AME02778.1	AME03962.1	AXE86_01020	AXE86_07685	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.	0.999
AME02778.1	AME03963.1	AXE86_01020	AXE86_07690	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AME02779.1	AME02778.1	AXE86_01025	AXE86_01020	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.625
AME02779.1	AME02782.1	AXE86_01025	AXE86_01040	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
AME02782.1	AME02778.1	AXE86_01040	AXE86_01020	Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.628
AME02782.1	AME02779.1	AXE86_01040	AXE86_01025	Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.776
AME03168.1	AME03169.1	AXE86_03160	AXE86_03165	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RemA family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
AME03168.1	dapF	AXE86_03160	AXE86_03170	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RemA family.	Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.	0.819
AME03169.1	AME03168.1	AXE86_03165	AXE86_03160	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RemA family.	0.919
AME03169.1	dapF	AXE86_03165	AXE86_03170	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.	0.792
AME03209.1	AME03909.1	AXE86_03395	AXE86_07410	Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.	Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
AME03209.1	dapF	AXE86_03395	AXE86_03170	Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.	Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.	0.913
AME03909.1	AME02776.1	AXE86_07410	AXE86_01010	Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.921
AME03909.1	AME03209.1	AXE86_07410	AXE86_03395	Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.	0.920