STRINGSTRING
queF queF mprF mprF folE2 folE2 queC queC rsgA rsgA AME02858.1 AME02858.1 AME02859.1 AME02859.1 AME02860.1 AME02860.1 AME02861.1 AME02861.1 AME02862.1 AME02862.1 AME02863.1 AME02863.1 rlmN rlmN AME02865.1 AME02865.1 AME02866.1 AME02866.1 fmt fmt def def AME02869.1 AME02869.1 queE queE AME02871.1 AME02871.1 AME04661.1 AME04661.1 AME04662.1 AME04662.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
queF7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily. (163 aa)
mprFLysylphosphatidylglycerol synthetase; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms. (326 aa)
folE2GTP cyclohydrolase FolE2; Converts GTP to 7,8-dihydroneopterin triphosphate. (262 aa)
queC7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). (228 aa)
rsgARibosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. (289 aa)
AME02858.1Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (585 aa)
AME02859.1Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)
AME02860.1Cell cycle protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family. (423 aa)
AME02861.1Protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (237 aa)
AME02862.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (146 aa)
AME02863.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)
rlmN23S rRNA (adenine(2503)-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family. (346 aa)
AME02865.116S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. (449 aa)
AME02866.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (276 aa)
fmtmethionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. (315 aa)
defPeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. (156 aa)
AME02869.1Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
queERadical SAM protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds. (243 aa)
AME02871.16-pyruvoyl tetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (126 aa)
AME04661.1Thiamine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (245 aa)
AME04662.1Adenine nucleotide alpha hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TtcA family. (259 aa)
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 713030
Other names: S. sp. oral taxon 136, Selenomonas sp. oral taxon 136
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