(10 nodes) Import into cell network (Selenomonas)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AXE86_01795	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology. (321 aa)
	AME03228.1	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)
	AME03232.1	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
	AME03233.1	PTS mannose/fructose/sorbose transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology. (268 aa)
	AME03234.1	PTS fructose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)
	AME03684.1	Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 26 family. (453 aa)
	AME03816.1	PTS mannose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)
	AME03817.1	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology. (158 aa)
	AME04754.1	PTS mannose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)
	AME03818.1	PTS mannose transporter subunit IIAB; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)

Your Current Organism:

Selenomonas

NCBI taxonomy Id: 713030
Other names: S. sp. oral taxon 136, Selenomonas sp. oral taxon 136

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AME03228.1	AME03232.1	AXE86_03495	AXE86_03525	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AME03228.1	AME03233.1	AXE86_03495	AXE86_03530	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose/fructose/sorbose transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AME03228.1	AME03234.1	AXE86_03495	AXE86_03535	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS fructose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AME03228.1	AME03684.1	AXE86_03495	AXE86_06150	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 26 family.	0.900
AME03228.1	AME03816.1	AXE86_03495	AXE86_06920	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.923
AME03228.1	AME03817.1	AXE86_03495	AXE86_06925	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975
AME03228.1	AME03818.1	AXE86_03495	AXE86_06935	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose transporter subunit IIAB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.943
AME03228.1	AME04754.1	AXE86_03495	AXE86_06930	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.941
AME03228.1	AXE86_01795	AXE86_03495	AXE86_01795	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.915
AME03232.1	AME03228.1	AXE86_03525	AXE86_03495	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AME03232.1	AME03233.1	AXE86_03525	AXE86_03530	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose/fructose/sorbose transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AME03232.1	AME03234.1	AXE86_03525	AXE86_03535	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS fructose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AME03232.1	AME03684.1	AXE86_03525	AXE86_06150	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 26 family.	0.900
AME03232.1	AME03816.1	AXE86_03525	AXE86_06920	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AME03232.1	AME03817.1	AXE86_03525	AXE86_06925	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.944
AME03232.1	AME04754.1	AXE86_03525	AXE86_06930	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AME03232.1	AXE86_01795	AXE86_03525	AXE86_01795	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.906
AME03233.1	AME03228.1	AXE86_03530	AXE86_03495	PTS mannose/fructose/sorbose transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.995
AME03233.1	AME03232.1	AXE86_03530	AXE86_03525	PTS mannose/fructose/sorbose transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS mannose transporter subunit IID; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AME03233.1	AME03234.1	AXE86_03530	AXE86_03535	PTS mannose/fructose/sorbose transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.	PTS fructose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998