(6 nodes) Starch and sucrose metabolism, and Haloacid dehalogenase-like hydrolase network (Selenomonas)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AME03235.1	RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
	AXE86_03550	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (554 aa)
	AME03237.1	Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)
	AME03238.1	Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (430 aa)
	AME04274.1	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (621 aa)
	AME04275.1	Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (483 aa)

Your Current Organism:

Selenomonas

NCBI taxonomy Id: 713030
Other names: S. sp. oral taxon 136, Selenomonas sp. oral taxon 136

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AME03235.1	AME04274.1	AXE86_03540	AXE86_09405	RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.863
AME03235.1	AME04275.1	AXE86_03540	AXE86_09410	RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.	0.500
AME03237.1	AME03238.1	AXE86_03555	AXE86_03560	Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
AME03237.1	AME04274.1	AXE86_03555	AXE86_09405	Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.555
AME03237.1	AXE86_03550	AXE86_03555	AXE86_03550	Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
AME03238.1	AME03237.1	AXE86_03560	AXE86_03555	Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.740
AME03238.1	AME04275.1	AXE86_03560	AXE86_09410	Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.	0.911
AME03238.1	AXE86_03550	AXE86_03560	AXE86_03550	Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
AME04274.1	AME03235.1	AXE86_09405	AXE86_03540	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.863
AME04274.1	AME03237.1	AXE86_09405	AXE86_03555	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.555
AME04274.1	AME04275.1	AXE86_09405	AXE86_09410	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.	0.999
AME04274.1	AXE86_03550	AXE86_09405	AXE86_03550	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AME04275.1	AME03235.1	AXE86_09410	AXE86_03540	Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.	RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.500
AME04275.1	AME03238.1	AXE86_09410	AXE86_03560	Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.	Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.911
AME04275.1	AME04274.1	AXE86_09410	AXE86_09405	Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
AME04275.1	AXE86_03550	AXE86_09410	AXE86_03550	Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.960
AXE86_03550	AME03237.1	AXE86_03550	AXE86_03555	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.778
AXE86_03550	AME03238.1	AXE86_03550	AXE86_03560	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.973
AXE86_03550	AME04274.1	AXE86_03550	AXE86_09405	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.914
AXE86_03550	AME04275.1	AXE86_03550	AXE86_09410	protein-N(pi)-phosphohistidine--sugar phosphotransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.	0.960