STRINGSTRING
gatC gatC AME03084.1 AME03084.1 AME03085.1 AME03085.1 AME03704.1 AME03704.1 AME03705.1 AME03705.1 AME03706.1 AME03706.1 gatC-2 gatC-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gatCPTS galactitol transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
AME03084.1PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (94 aa)
AME03085.1PTS glucose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology. (156 aa)
AME03704.1PTS ascorbate transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (151 aa)
AME03705.1PTS galactitol transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology. (93 aa)
AME03706.1PTS galactitol transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology. (452 aa)
gatC-2PTS galactitol transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology. (420 aa)
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 713030
Other names: S. sp. oral taxon 136, Selenomonas sp. oral taxon 136
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