STRINGSTRING
AME03819.1 AME03819.1 AME03820.1 AME03820.1 AME03821.1 AME03821.1 AME03822.1 AME03822.1 AME03823.1 AME03823.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AME03819.1Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (350 aa)
AME03820.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (642 aa)
AME03821.1Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family. (121 aa)
AME03822.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (327 aa)
AME03823.1DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (214 aa)
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 713030
Other names: S. sp. oral taxon 136, Selenomonas sp. oral taxon 136
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