STRINGSTRING
AME03112.1 AME03112.1 AME03113.1 AME03113.1 galT galT AME03115.1 AME03115.1 galK galK AME03117.1 AME03117.1 AME03118.1 AME03118.1 AME03119.1 AME03119.1 AME03466.1 AME03466.1 AME03486.1 AME03486.1 fucI fucI AME03488.1 AME03488.1 AME03489.1 AME03489.1 AME03490.1 AME03490.1 AME03491.1 AME03491.1 AME03793.1 AME03793.1 AME04117.1 AME04117.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AME03112.1Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (741 aa)
AME03113.1LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
galTGalactose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (502 aa)
AME03115.1UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (329 aa)
galKGalactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. (389 aa)
AME03117.1Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1043 aa)
AME03118.1Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)
AME03119.1Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (201 aa)
AME03466.1Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (255 aa)
AME03486.1AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (288 aa)
fucIL-fucose isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. (596 aa)
AME03488.1Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (490 aa)
AME03489.1Fucose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RbsD / FucU family. (147 aa)
AME03490.1Fuculose phosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
AME03491.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)
AME03793.1Galactose mutarotase; Converts alpha-aldose to the beta-anomer. (357 aa)
AME04117.1Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 713030
Other names: S. sp. oral taxon 136, Selenomonas sp. oral taxon 136
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