(12 nodes) Sulfur amino acid biosynthetic process network (Selenomonas)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AME04643.1	Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (433 aa)
	trpB	Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (395 aa)
	mmuM	Converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
	asd	Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family. (343 aa)
	metAA	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. (308 aa)
	AME03269.1	Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family. (311 aa)
	AME03713.1	Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
	folD	Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. (284 aa)
	AME04132.1	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (372 aa)
	mtnA	Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). (351 aa)
	AME04295.1	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
	AME04472.1	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (240 aa)

Your Current Organism:

Selenomonas

NCBI taxonomy Id: 713030
Other names: S. sp. oral taxon 136, Selenomonas sp. oral taxon 136

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AME03269.1	AME04132.1	AXE86_03725	AXE86_08625	Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.824
AME03269.1	AME04472.1	AXE86_03725	AXE86_10525	Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.994
AME03269.1	mmuM	AXE86_03725	AXE86_02005	Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.	Converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.811
AME03713.1	AME04472.1	AXE86_06330	AXE86_10525	Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.826
AME04132.1	AME03269.1	AXE86_08625	AXE86_03725	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.824
AME04132.1	AME04643.1	AXE86_08625	AXE86_11505	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.878
AME04132.1	metAA	AXE86_08625	AXE86_03475	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	0.593
AME04132.1	mmuM	AXE86_08625	AXE86_02005	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.944
AME04295.1	metAA	AXE86_09515	AXE86_03475	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	0.500
AME04472.1	AME03269.1	AXE86_10525	AXE86_03725	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.	0.994
AME04472.1	AME03713.1	AXE86_10525	AXE86_06330	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.826
AME04472.1	AME04643.1	AXE86_10525	AXE86_11505	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.848
AME04472.1	trpB	AXE86_10525	AXE86_01285	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.	0.955
AME04643.1	AME04132.1	AXE86_11505	AXE86_08625	Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.878
AME04643.1	AME04472.1	AXE86_11505	AXE86_10525	Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.848
AME04643.1	asd	AXE86_11505	AXE86_02795	Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.	0.972
AME04643.1	metAA	AXE86_11505	AXE86_03475	Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	0.945
AME04643.1	mmuM	AXE86_11505	AXE86_02005	Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.830
asd	AME04643.1	AXE86_02795	AXE86_11505	Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.	Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.972
metAA	AME04132.1	AXE86_03475	AXE86_08625	Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.	Methionine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.593