STRINGSTRING
AME03112.1 AME03112.1 AME04275.1 AME04275.1 AME04250.1 AME04250.1 glgB glgB AME04125.1 AME04125.1 AME04048.1 AME04048.1 flgG flgG AME03954.1 AME03954.1 AME03712.1 AME03712.1 AME03684.1 AME03684.1 AXE86_03550 AXE86_03550 AME03117.1 AME03117.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AME03112.1Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (741 aa)
AME04275.1Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. (483 aa)
AME04250.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1149 aa)
glgBGlycogen-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (815 aa)
AME04125.1Flagellar biosynthesis protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology. (527 aa)
AME04048.1Flagellar biosynthesis protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology. (696 aa)
flgGFlagellar basal-body rod protein FlgG; Makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
AME03954.1Flagellar basal-body rod protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
AME03712.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (233 aa)
AME03684.1Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 26 family. (453 aa)
AXE86_03550protein-N(pi)-phosphohistidine--sugar phosphotransferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (554 aa)
AME03117.1Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1043 aa)
Your Current Organism:
Selenomonas
NCBI taxonomy Id: 713030
Other names: S. sp. oral taxon 136, Selenomonas sp. oral taxon 136
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