Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AME02984.1 | galK | AXE86_02140 | AXE86_02875 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. | 0.661 |
| AME02984.1 | rbsK | AXE86_02140 | AXE86_06770 | Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.504 |
| AME03158.1 | AME03708.1 | AXE86_03110 | AXE86_06300 | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | With DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.996 |
| AME03158.1 | AME03709.1 | AXE86_03110 | AXE86_06305 | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| AME03158.1 | AME04043.1 | AXE86_03110 | AXE86_08110 | Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Dihydroxyacetone kinase; With DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| AME03163.1 | AME03238.1 | AXE86_03135 | AXE86_03560 | Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.419 |
| AME03163.1 | AME04207.1 | AXE86_03135 | AXE86_09025 | Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.439 |
| AME03163.1 | AME04283.1 | AXE86_03135 | AXE86_09455 | Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | F420-0:Gamma-glutamyl ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.597 |
| AME03163.1 | AME04746.1 | AXE86_03135 | AXE86_06325 | Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.648 |
| AME03191.1 | kdsA | AXE86_03290 | AXE86_03300 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 2-dehydro-3-deoxyphosphooctonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family. | 0.998 |
| AME03191.1 | kdsB | AXE86_03290 | AXE86_03305 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria. | 0.989 |
| AME03238.1 | AME03163.1 | AXE86_03560 | AXE86_03135 | Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.419 |
| AME03238.1 | AME04207.1 | AXE86_03560 | AXE86_09025 | Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.903 |
| AME03238.1 | AME04275.1 | AXE86_03560 | AXE86_09410 | Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family. | 0.911 |
| AME03238.1 | mtlD | AXE86_03560 | AXE86_01170 | Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Mannitol-1-phosphate 5-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.902 |
| AME03238.1 | pfkA | AXE86_03560 | AXE86_03915 | Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.916 |
| AME03238.1 | pfkA-2 | AXE86_03560 | AXE86_05400 | Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.916 |
| AME03238.1 | pfp | AXE86_03560 | AXE86_02220 | Hexokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.916 |
| AME03436.1 | AME03437.1 | AXE86_04705 | AXE86_04710 | Heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lipopolysaccharide heptosyltransferase I; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.843 |
| AME03437.1 | AME03436.1 | AXE86_04710 | AXE86_04705 | Lipopolysaccharide heptosyltransferase I; Derived by automated computational analysis using gene prediction method: Protein Homology. | Heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.843 |
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