STRINGSTRING
LSA_01840 LSA_01840 artM artM LSA_01860 LSA_01860 LSA_01990 LSA_01990 LSA_08540 LSA_08540 tcyB tcyB glnQ glnQ LSA_10490 LSA_10490 glnP glnP glnM glnM glnH glnH glnQ-2 glnQ-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LSA_01840Hypothetical protein. (214 aa)
artMArginine transport ATP-binding protein artM. (212 aa)
LSA_01860Hypothetical protein. (260 aa)
LSA_01990Hypothetical protein. (241 aa)
LSA_08540Putative amino-acid ABC transporter ATP-binding protein. (253 aa)
tcyBL-cystine transport system permease protein tcyB. (231 aa)
glnQGlutamine transport ATP-binding protein glnQ. (247 aa)
LSA_10490Hypothetical protein. (489 aa)
glnPPutative glutamine ABC transporter permease protein glnP. (218 aa)
glnMPutative glutamine ABC transporter permease protein glnM. (217 aa)
glnHABC transporter glutamine-binding protein glnH. (263 aa)
glnQ-2Glutamine transport ATP-binding protein glnQ. (270 aa)
Your Current Organism:
Lactobacillus sanfranciscensis
NCBI taxonomy Id: 714313
Other names: L. sanfranciscensis TMW 1.1304, Lactobacillus sanfranciscensis TMW 1.1304
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