STRINGSTRING
glyA glyA iscS iscS patA patA mtnE mtnE LSA_01440 LSA_01440 LSA_02330 LSA_02330 patA-2 patA-2 LSA_09250 LSA_09250
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (413 aa)
iscSCysteine desulfurase. (386 aa)
patAPutative aminotransferase A. (335 aa)
mtnETransaminase mtnE. (338 aa)
LSA_01440Hypothetical protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (442 aa)
LSA_02330Hypothetical protein. (394 aa)
patA-2Putative aminotransferase A. (398 aa)
LSA_09250NifS/icsS protein-like protein. (381 aa)
Your Current Organism:
Lactobacillus sanfranciscensis
NCBI taxonomy Id: 714313
Other names: L. sanfranciscensis TMW 1.1304, Lactobacillus sanfranciscensis TMW 1.1304
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