39 items (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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Your Input:
	RP20_CCG004524	Putative nuclear mrna splicing via spliceosome; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (79 aa)
	RP20_CCG025571	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
	RP20_CCG002793	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (101 aa)
	RP20_CCG024392	Putative dna-directed rna polymerase subunit e. (173 aa)
	RP20_CCG010291	Putative translation initiation factor 4f helicase subunit eif-4a; Belongs to the DEAD box helicase family. (439 aa)
	RP20_CCG005019	Putative secreted protein. (588 aa)
	RP20_CCG002067	5'-3' exoribonuclease 1. (1661 aa)
	RP20_CCG003345	USP domain-containing protein. (375 aa)
	RP20_CCG004363	5'-3' exoribonuclease 1. (1671 aa)
	RP20_CCG004829	SAM_Exu domain-containing protein. (603 aa)
	RP20_CCG005887	Nanos-type domain-containing protein; Belongs to the nanos family. (242 aa)
	RP20_CCG006866	Uncharacterized protein. (372 aa)
	RP20_CCG007189	Uncharacterized protein. (374 aa)
	RP20_CCG008891	mRNA_decap_C domain-containing protein. (479 aa)
	RP20_CCG009981	mRNA_decap_C domain-containing protein. (476 aa)
	RP20_CCG010790	Uncharacterized protein. (639 aa)
	RP20_CCG011173	Uncharacterized protein. (440 aa)
	RP20_CCG013829	Uncharacterized protein. (599 aa)
	RP20_CCG016116	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (134 aa)
	PAN3	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (537 aa)
	RP20_CCG016805	UBA domain-containing protein. (1541 aa)
	RP20_CCG016807	RRM domain-containing protein. (1535 aa)
	RP20_CCG016808	UBA domain-containing protein. (1315 aa)
	RP20_CCG017263	Uncharacterized protein. (290 aa)
	RP20_CCG018239	Uncharacterized protein. (559 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (120 aa)
	RP20_CCG020474	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1227 aa)
	RP20_CCG020548	Uncharacterized protein. (893 aa)
	RP20_CCG020776	Uncharacterized protein; Belongs to the argonaute family. (898 aa)
	RP20_CCG020946	NOT2_3_5 domain-containing protein. (372 aa)
	PAN2	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1291 aa)
	RP20_CCG022422	Uncharacterized protein. (616 aa)
	RP20_CCG022750	Uncharacterized protein. (639 aa)
	RP20_CCG023009	Uncharacterized protein. (748 aa)
	RP20_CCG023647	Uncharacterized protein. (663 aa)
	RP20_CCG024292	Uncharacterized protein. (2419 aa)
	RP20_CCG025161	Nudix hydrolase domain-containing protein. (462 aa)
	RP20_CCG027188	PAT1 domain-containing protein. (807 aa)
	RP20_CCG027552	Uncharacterized protein. (983 aa)

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM4	RP20_CCG002067	A0A182GZI8	A0A182G3E4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	5'-3' exoribonuclease 1.	0.764
LSM4	RP20_CCG002793	A0A182GZI8	A0A023EER6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996
LSM4	RP20_CCG004363	A0A182GZI8	A0A182G723	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	5'-3' exoribonuclease 1.	0.764
LSM4	RP20_CCG004524	A0A182GZI8	A0A023EBK5	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Putative nuclear mrna splicing via spliceosome; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
LSM4	RP20_CCG008891	A0A182GZI8	A0A182GF77	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	mRNA_decap_C domain-containing protein.	0.836
LSM4	RP20_CCG009981	A0A182GZI8	A0A182GHH4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	mRNA_decap_C domain-containing protein.	0.836
LSM4	RP20_CCG010291	A0A182GZI8	A0A023ES83	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Putative translation initiation factor 4f helicase subunit eif-4a; Belongs to the DEAD box helicase family.	0.935
LSM4	RP20_CCG011173	A0A182GZI8	A0A182GJT8	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.883
LSM4	RP20_CCG013829	A0A182GZI8	A0A182GQ93	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.470
LSM4	RP20_CCG016116	A0A182GZI8	A0A182GUR6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.998
LSM4	RP20_CCG018239	A0A182GZI8	A0A182GYL7	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.470
LSM4	RP20_CCG023009	A0A182GZI8	A0A182H6X7	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.944
LSM4	RP20_CCG025161	A0A182GZI8	A0A182HA81	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Nudix hydrolase domain-containing protein.	0.927
LSM4	RP20_CCG025571	A0A182GZI8	A0A023ECH8	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM4	RP20_CCG027188	A0A182GZI8	A0A182HDG6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	PAT1 domain-containing protein.	0.944
PAN2	PAN3	A0A182H522	A0A182GV74	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...]	0.997
PAN2	RP20_CCG006866	A0A182H522	A0A182GBB7	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	Uncharacterized protein.	0.478
PAN2	RP20_CCG016805	A0A182H522	A0A182GW21	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	UBA domain-containing protein.	0.495
PAN2	RP20_CCG016807	A0A182H522	A0A182GW22	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	RRM domain-containing protein.	0.495
PAN2	RP20_CCG016808	A0A182H522	A0A182GW23	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...]	UBA domain-containing protein.	0.533