42 items (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RP20_CCG004123	Protein kinase domain-containing protein. (793 aa)
	RP20_CCG004959	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (79 aa)
	RP20_CCG004961	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (606 aa)
	RP20_CCG005314	Uncharacterized protein. (629 aa)
	RP20_CCG006243	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (881 aa)
	RP20_CCG008030	Uncharacterized protein. (1108 aa)
	RP20_CCG008417	Uncharacterized protein. (629 aa)
	RP20_CCG002028	Uncharacterized protein. (2693 aa)
	RP20_CCG008435	Uncharacterized protein. (89 aa)
	RP20_CCG009170	Protein kinase domain-containing protein. (804 aa)
	RP20_CCG009744	Suppressor of fused homolog. (454 aa)
	RP20_CCG009820	P53 domain-containing protein. (455 aa)
	RP20_CCG009822	Peptidase S59 domain-containing protein. (1917 aa)
	RP20_CCG009823	P53 domain-containing protein. (438 aa)
	RP20_CCG010058	Uncharacterized protein. (180 aa)
	RP20_CCG010437	P53 domain-containing protein. (449 aa)
	RP20_CCG010440	Peptidase S59 domain-containing protein. (1917 aa)
	RP20_CCG010441	P53 domain-containing protein. (428 aa)
	RP20_CCG011504	RanGAP1_C domain-containing protein. (585 aa)
	RP20_CCG011941	Uncharacterized protein. (847 aa)
	RP20_CCG011992	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (223 aa)
	RP20_CCG012162	Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5638 aa)
	RP20_CCG012696	Lipocln_cytosolic_FA-bd_dom domain-containing protein; Belongs to the calycin superfamily. Lipocalin family. (256 aa)
	RP20_CCG014598	Uncharacterized protein. (1452 aa)
	RP20_CCG015618	RanGAP1_C domain-containing protein. (585 aa)
	RP20_CCG017199	Uncharacterized protein. (1304 aa)
	RP20_CCG018619	BTB domain-containing protein. (345 aa)
	RP20_CCG015971	Hipothetical protein; Belongs to the protein kinase superfamily. (353 aa)
	RP20_CCG000359	Uncharacterized protein. (513 aa)
	RP20_CCG000523	LisH domain-containing protein. (81 aa)
	RP20_CCG000800	Uncharacterized protein. (545 aa)
	RP20_CCG020159	Uncharacterized protein. (754 aa)
	RP20_CCG021147	BTB domain-containing protein. (322 aa)
	RP20_CCG021780	C3H1-type domain-containing protein. (1081 aa)
	RP20_CCG023165	FABD domain-containing protein. (844 aa)
	RP20_CCG023334	Uncharacterized protein. (1475 aa)
	RP20_CCG024208	FCP1 homology domain-containing protein. (716 aa)
	RP20_CCG024830	BTB domain-containing protein. (351 aa)
	RP20_CCG002168	Uncharacterized protein. (338 aa)
	RP20_CCG002723	Uncharacterized protein. (1302 aa)
	RP20_CCG002804	BTB domain-containing protein. (175 aa)
	RP20_CCG003339	RanBP2-type domain-containing protein. (752 aa)

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG000359	RP20_CCG002028	A0A182G103	A0A182G3B9	Uncharacterized protein.	Uncharacterized protein.	0.801
RP20_CCG000359	RP20_CCG006243	A0A182G103	A0A182GA99	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.470
RP20_CCG000359	RP20_CCG011504	A0A182G103	A0A182GKJ3	Uncharacterized protein.	RanGAP1_C domain-containing protein.	0.737
RP20_CCG000359	RP20_CCG015618	A0A182G103	A0A182GTR2	Uncharacterized protein.	RanGAP1_C domain-containing protein.	0.737
RP20_CCG000359	RP20_CCG020159	A0A182G103	A0A182H213	Uncharacterized protein.	Uncharacterized protein.	0.667
RP20_CCG002028	RP20_CCG000359	A0A182G3B9	A0A182G103	Uncharacterized protein.	Uncharacterized protein.	0.801
RP20_CCG002028	RP20_CCG002723	A0A182G3B9	A0A182G4G8	Uncharacterized protein.	Uncharacterized protein.	0.929
RP20_CCG002028	RP20_CCG006243	A0A182G3B9	A0A182GA99	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.949
RP20_CCG002028	RP20_CCG009822	A0A182G3B9	A0A182GH62	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.844
RP20_CCG002028	RP20_CCG010058	A0A182G3B9	A0A182GHN6	Uncharacterized protein.	Uncharacterized protein.	0.801
RP20_CCG002028	RP20_CCG010440	A0A182G3B9	A0A182GIE9	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.844
RP20_CCG002028	RP20_CCG011504	A0A182G3B9	A0A182GKJ3	Uncharacterized protein.	RanGAP1_C domain-containing protein.	0.959
RP20_CCG002028	RP20_CCG011941	A0A182G3B9	A0A182GLE1	Uncharacterized protein.	Uncharacterized protein.	0.903
RP20_CCG002028	RP20_CCG015618	A0A182G3B9	A0A182GTR2	Uncharacterized protein.	RanGAP1_C domain-containing protein.	0.995
RP20_CCG002028	RP20_CCG017199	A0A182G3B9	A0A182GWQ8	Uncharacterized protein.	Uncharacterized protein.	0.884
RP20_CCG002028	RP20_CCG020159	A0A182G3B9	A0A182H213	Uncharacterized protein.	Uncharacterized protein.	0.919
RP20_CCG002168	RP20_CCG021147	A0A182G3K3	A0A182H3U0	Uncharacterized protein.	BTB domain-containing protein.	0.906
RP20_CCG002723	RP20_CCG002028	A0A182G4G8	A0A182G3B9	Uncharacterized protein.	Uncharacterized protein.	0.929
RP20_CCG002723	RP20_CCG006243	A0A182G4G8	A0A182GA99	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.994
RP20_CCG002723	RP20_CCG009822	A0A182G4G8	A0A182GH62	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.953