STRINGSTRING
RP20_CCG016807 RP20_CCG016807 PAN3 PAN3 RP20_CCG016116 RP20_CCG016116 RP20_CCG027188 RP20_CCG027188 RP20_CCG025161 RP20_CCG025161 RP20_CCG023647 RP20_CCG023647 RP20_CCG023009 RP20_CCG023009 RP20_CCG022750 RP20_CCG022750 PAN2 PAN2 RP20_CCG020776 RP20_CCG020776 RP20_CCG020474 RP20_CCG020474 RP20_CCG011173 RP20_CCG011173 RP20_CCG010790 RP20_CCG010790 RP20_CCG009981 RP20_CCG009981 RP20_CCG008891 RP20_CCG008891 RP20_CCG007311 RP20_CCG007311 RP20_CCG004829 RP20_CCG004829 RP20_CCG003345 RP20_CCG003345 RP20_CCG010291 RP20_CCG010291 RP20_CCG024392 RP20_CCG024392 RP20_CCG016808 RP20_CCG016808 RP20_CCG017263 RP20_CCG017263 RP20_CCG016805 RP20_CCG016805
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RP20_CCG016807RRM domain-containing protein. (1535 aa)
PAN3PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (537 aa)
RP20_CCG016116U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (134 aa)
RP20_CCG027188PAT1 domain-containing protein. (807 aa)
RP20_CCG025161Nudix hydrolase domain-containing protein. (462 aa)
RP20_CCG023647Uncharacterized protein. (663 aa)
RP20_CCG023009Uncharacterized protein. (748 aa)
RP20_CCG022750Uncharacterized protein. (639 aa)
PAN2PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1291 aa)
RP20_CCG020776Uncharacterized protein; Belongs to the argonaute family. (898 aa)
RP20_CCG020474DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1227 aa)
RP20_CCG011173Uncharacterized protein. (440 aa)
RP20_CCG010790Uncharacterized protein. (639 aa)
RP20_CCG009981mRNA_decap_C domain-containing protein. (476 aa)
RP20_CCG008891mRNA_decap_C domain-containing protein. (479 aa)
RP20_CCG007311Uncharacterized protein. (1386 aa)
RP20_CCG004829SAM_Exu domain-containing protein. (603 aa)
RP20_CCG003345USP domain-containing protein. (375 aa)
RP20_CCG010291Putative translation initiation factor 4f helicase subunit eif-4a; Belongs to the DEAD box helicase family. (439 aa)
RP20_CCG024392Putative dna-directed rna polymerase subunit e. (173 aa)
RP20_CCG016808UBA domain-containing protein. (1315 aa)
RP20_CCG017263Uncharacterized protein. (290 aa)
RP20_CCG016805UBA domain-containing protein. (1541 aa)
Your Current Organism:
Aedes albopictus
NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito
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