68 items (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RP20_CCG026483	RRM domain-containing protein. (586 aa)
	RP20_CCG004524	Putative nuclear mrna splicing via spliceosome; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (79 aa)
	RP20_CCG025571	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
	RP20_CCG002793	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (101 aa)
	RP20_CCG010291	Putative translation initiation factor 4f helicase subunit eif-4a; Belongs to the DEAD box helicase family. (439 aa)
	RP20_CCG001109	Uncharacterized protein. (258 aa)
	RP20_CCG001120	RNase_PH domain-containing protein. (219 aa)
	RP20_CCG002395	Uncharacterized protein. (262 aa)
	RP20_CCG002994	Uncharacterized protein. (297 aa)
	RP20_CCG003345	USP domain-containing protein. (375 aa)
	RP20_CCG003898	Uncharacterized protein. (1141 aa)
	RP20_CCG006659	Sm domain-containing protein. (132 aa)
	RP20_CCG006866	Uncharacterized protein. (372 aa)
	RP20_CCG007114	WD_REPEATS_REGION domain-containing protein. (335 aa)
	RP20_CCG007690	RNA_bind domain-containing protein. (583 aa)
	RP20_CCG008031	Uncharacterized protein. (1200 aa)
	RP20_CCG008758	PAP-associated domain-containing protein. (1357 aa)
	RP20_CCG008891	mRNA_decap_C domain-containing protein. (479 aa)
	RP20_CCG009033	Uncharacterized protein. (274 aa)
	RP20_CCG009734	NTP_transf_2 domain-containing protein. (608 aa)
	RP20_CCG009981	mRNA_decap_C domain-containing protein. (476 aa)
	RP20_CCG010674	Uncharacterized protein. (435 aa)
	RP20_CCG011173	Uncharacterized protein. (440 aa)
	RP20_CCG012270	PAP-associated domain-containing protein. (157 aa)
	RP20_CCG012553	Uncharacterized protein; Belongs to the RNR ribonuclease family. (839 aa)
	RP20_CCG013089	tRNA_NucTransf2 domain-containing protein. (563 aa)
	RP20_CCG013551	Uncharacterized protein. (154 aa)
	RP20_CCG013626	Uncharacterized protein. (299 aa)
	RP20_CCG013855	Uncharacterized protein. (1222 aa)
	RP20_CCG013960	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (398 aa)
	RP20_CCG015710	RRM domain-containing protein. (98 aa)
	RP20_CCG015765	Helicase C-terminal domain-containing protein. (115 aa)
	RP20_CCG015894	Uncharacterized protein. (306 aa)
	RP20_CCG015898	RNase_PH domain-containing protein. (204 aa)
	RP20_CCG016116	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (134 aa)
	PAN3	PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] (537 aa)
	RP20_CCG017263	Uncharacterized protein. (290 aa)
	RP20_CCG017657	Tr-type G domain-containing protein. (652 aa)
	RP20_CCG018294	Endo/exonuclease/phosphatase domain-containing protein. (374 aa)
	LSM5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (183 aa)
	LSM4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (120 aa)
	RP20_CCG019224	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (419 aa)
	RP20_CCG019273	Uncharacterized protein. (122 aa)
	RP20_CCG019668	Uncharacterized protein. (967 aa)
	RP20_CCG020474	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1227 aa)
	RP20_CCG020548	Uncharacterized protein. (893 aa)
	RP20_CCG020674	Uncharacterized protein. (1222 aa)
	RP20_CCG020946	NOT2_3_5 domain-containing protein. (372 aa)
	RP20_CCG021659	Uncharacterized protein. (630 aa)
	PAN2	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] (1291 aa)
	RP20_CCG022234	KH_dom_type_1 domain-containing protein. (237 aa)
	RP20_CCG022469	Uncharacterized protein. (81 aa)
	RP20_CCG022736	RRM domain-containing protein. (134 aa)
	RP20_CCG022777	Uncharacterized protein. (653 aa)
	RP20_CCG023009	Uncharacterized protein. (748 aa)
	RP20_CCG024292	Uncharacterized protein. (2419 aa)
	RP20_CCG024456	Uncharacterized protein. (212 aa)
	RP20_CCG024610	Sm domain-containing protein. (130 aa)
	RP20_CCG024944	RRM domain-containing protein. (582 aa)
	RP20_CCG025161	Nudix hydrolase domain-containing protein. (462 aa)
	RP20_CCG025379	Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family. (190 aa)
	RP20_CCG025489	HBS1_N domain-containing protein. (176 aa)
	RP20_CCG025926	Uncharacterized protein. (274 aa)
	RP20_CCG026004	S1 domain-containing protein. (294 aa)
	RP20_CCG027188	PAT1 domain-containing protein. (807 aa)
	RP20_CCG027288	Uncharacterized protein. (574 aa)
	RP20_CCG027432	Uncharacterized protein. (498 aa)
	RP20_CCG027433	Uncharacterized protein. (609 aa)

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM4	LSM5	A0A182GZI8	A0A182GZG7	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
LSM4	RP20_CCG002395	A0A182GZI8	A0A182G3X6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.477
LSM4	RP20_CCG002793	A0A182GZI8	A0A023EER6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.996
LSM4	RP20_CCG002994	A0A182GZI8	A0A182G4W0	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.970
LSM4	RP20_CCG004524	A0A182GZI8	A0A023EBK5	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Putative nuclear mrna splicing via spliceosome; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
LSM4	RP20_CCG006659	A0A182GZI8	A0A182GAZ1	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.997
LSM4	RP20_CCG008891	A0A182GZI8	A0A182GF77	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	mRNA_decap_C domain-containing protein.	0.836
LSM4	RP20_CCG009981	A0A182GZI8	A0A182GHH4	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	mRNA_decap_C domain-containing protein.	0.836
LSM4	RP20_CCG010291	A0A182GZI8	A0A023ES83	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Putative translation initiation factor 4f helicase subunit eif-4a; Belongs to the DEAD box helicase family.	0.935
LSM4	RP20_CCG011173	A0A182GZI8	A0A182GJT8	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.883
LSM4	RP20_CCG015765	A0A182GZI8	A0A182GU17	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Helicase C-terminal domain-containing protein.	0.565
LSM4	RP20_CCG016116	A0A182GZI8	A0A182GUR6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.998
LSM4	RP20_CCG019273	A0A182GZI8	A0A182H0J2	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.885
LSM4	RP20_CCG023009	A0A182GZI8	A0A182H6X7	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Uncharacterized protein.	0.944
LSM4	RP20_CCG024610	A0A182GZI8	A0A182H9D3	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Sm domain-containing protein.	0.972
LSM4	RP20_CCG025161	A0A182GZI8	A0A182HA81	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Nudix hydrolase domain-containing protein.	0.927
LSM4	RP20_CCG025571	A0A182GZI8	A0A023ECH8	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM4	RP20_CCG027188	A0A182GZI8	A0A182HDG6	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	PAT1 domain-containing protein.	0.944
LSM5	LSM4	A0A182GZG7	A0A182GZI8	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM5	RP20_CCG002793	A0A182GZG7	A0A023EER6	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.998