30 items (Aedes albopictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RP20_CCG017199	Uncharacterized protein. (1304 aa)
	RP20_CCG018470	Uncharacterized protein. (2263 aa)
	RP20_CCG019710	Uncharacterized protein. (2013 aa)
	RP20_CCG020781	Uncharacterized protein. (576 aa)
	RP20_CCG021034	Uncharacterized protein. (1910 aa)
	RP20_CCG022804	Uncharacterized protein; Belongs to the WD repeat SEC13 family. (360 aa)
	RP20_CCG025574	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (326 aa)
	RP20_CCG025748	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). (689 aa)
	RP20_CCG006243	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (881 aa)
	RP20_CCG027625	Uncharacterized protein. (329 aa)
	RP20_CCG012008	Uncharacterized protein. (798 aa)
	RP20_CCG007408	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family. (334 aa)
	RP20_CCG018447	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (214 aa)
	RP20_CCG021883	Putative nuclear pore complex component sc seh1; Belongs to the WD repeat SEC13 family. (326 aa)
	RP20_CCG000359	Uncharacterized protein. (513 aa)
	RP20_CCG001170	WD_REPEATS_REGION domain-containing protein. (323 aa)
	RP20_CCG007593	Nucleoporin_C domain-containing protein. (552 aa)
	RP20_CCG002723	Uncharacterized protein. (1302 aa)
	RP20_CCG011504	RanGAP1_C domain-containing protein. (585 aa)
	RP20_CCG007784	WD_REPEATS_REGION domain-containing protein. (374 aa)
	RP20_CCG009205	Uncharacterized protein. (728 aa)
	RP20_CCG009822	Peptidase S59 domain-containing protein. (1917 aa)
	RP20_CCG010058	Uncharacterized protein. (180 aa)
	RP20_CCG010440	Peptidase S59 domain-containing protein. (1917 aa)
	RP20_CCG010814	Uncharacterized protein. (1145 aa)
	RP20_CCG005285	Uncharacterized protein. (907 aa)
	RP20_CCG012556	Nuclear pore protein. (803 aa)
	RP20_CCG015618	RanGAP1_C domain-containing protein. (585 aa)
	RP20_CCG006513	Uncharacterized protein. (1145 aa)
	RP20_CCG006400	Uncharacterized protein. (548 aa)

Your Current Organism:

Aedes albopictus

NCBI taxonomy Id: 7160
Other names: A. albopictus, Asian tiger mosquito, Stegomyia albopicta, forest day mosquito

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
RP20_CCG000359	RP20_CCG006243	A0A182G103	A0A182GA99	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.470
RP20_CCG000359	RP20_CCG011504	A0A182G103	A0A182GKJ3	Uncharacterized protein.	RanGAP1_C domain-containing protein.	0.737
RP20_CCG000359	RP20_CCG012556	A0A182G103	A0A182GML5	Uncharacterized protein.	Nuclear pore protein.	0.739
RP20_CCG000359	RP20_CCG015618	A0A182G103	A0A182GTR2	Uncharacterized protein.	RanGAP1_C domain-containing protein.	0.737
RP20_CCG000359	RP20_CCG018447	A0A182G103	A0A023EJU2	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.954
RP20_CCG001170	RP20_CCG002723	A0A182G250	A0A182G4G8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.954
RP20_CCG001170	RP20_CCG005285	A0A182G250	A0A182G8P7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.560
RP20_CCG001170	RP20_CCG006243	A0A182G250	A0A182GA99	WD_REPEATS_REGION domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.999
RP20_CCG001170	RP20_CCG006400	A0A182G250	A0A182GAJ8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.842
RP20_CCG001170	RP20_CCG006513	A0A182G250	A0A182GAR2	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.893
RP20_CCG001170	RP20_CCG007408	A0A182G250	A0A182GCB0	WD_REPEATS_REGION domain-containing protein.	Nucleoporin NUP53; Functions as a component of the nuclear pore complex (NPC). Belongs to the Nup35 family.	0.946
RP20_CCG001170	RP20_CCG007593	A0A182G250	A0A182GCM4	WD_REPEATS_REGION domain-containing protein.	Nucleoporin_C domain-containing protein.	0.999
RP20_CCG001170	RP20_CCG007784	A0A182G250	A0A182GD06	WD_REPEATS_REGION domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.999
RP20_CCG001170	RP20_CCG009822	A0A182G250	A0A182GH62	WD_REPEATS_REGION domain-containing protein.	Peptidase S59 domain-containing protein.	0.995
RP20_CCG001170	RP20_CCG010440	A0A182G250	A0A182GIE9	WD_REPEATS_REGION domain-containing protein.	Peptidase S59 domain-containing protein.	0.953
RP20_CCG001170	RP20_CCG010814	A0A182G250	A0A182GJ54	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.893
RP20_CCG001170	RP20_CCG011504	A0A182G250	A0A182GKJ3	WD_REPEATS_REGION domain-containing protein.	RanGAP1_C domain-containing protein.	0.585
RP20_CCG001170	RP20_CCG012556	A0A182G250	A0A182GML5	WD_REPEATS_REGION domain-containing protein.	Nuclear pore protein.	0.969
RP20_CCG001170	RP20_CCG015618	A0A182G250	A0A182GTR2	WD_REPEATS_REGION domain-containing protein.	RanGAP1_C domain-containing protein.	0.585
RP20_CCG001170	RP20_CCG017199	A0A182G250	A0A182GWQ8	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.998